BLASTX nr result

ID: Glycyrrhiza23_contig00028121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028121
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              135   5e-30
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   135   5e-30
ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   106   2e-21

>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/95 (67%), Positives = 81/95 (85%)
 Frame = +2

Query: 2   CIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSACVKHNDVVMGHTAALRAIELAPE 181
           C+IDL  RAGRLE+ALGV++++P E D+L WK ILSA +KH  + +G +AALRAIELAP+
Sbjct: 385 CMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPD 444

Query: 182 DSSCYVLLSNIYAKQGRWDDVSKVRSMMKKRGVRK 286
           DSS YVLLSNIYAK GRWDDV+K+R MM++RGV+K
Sbjct: 445 DSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKK 479


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/95 (67%), Positives = 81/95 (85%)
 Frame = +2

Query: 2   CIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSACVKHNDVVMGHTAALRAIELAPE 181
           C+IDL  RAGRLE+ALGV++++P E D+L WK ILSA +KH  + +G +AALRAIELAP+
Sbjct: 373 CMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPD 432

Query: 182 DSSCYVLLSNIYAKQGRWDDVSKVRSMMKKRGVRK 286
           DSS YVLLSNIYAK GRWDDV+K+R MM++RGV+K
Sbjct: 433 DSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKK 467


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/95 (67%), Positives = 81/95 (85%)
 Frame = +2

Query: 2   CIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSACVKHNDVVMGHTAALRAIELAPE 181
           C+IDL  RAGRLE+ALGV++++P E D+L WK ILSA +KH  + +G +AALRAIELAP+
Sbjct: 416 CMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPD 475

Query: 182 DSSCYVLLSNIYAKQGRWDDVSKVRSMMKKRGVRK 286
           DSS YVLLSNIYAK GRWDDV+K+R MM++RGV+K
Sbjct: 476 DSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKK 510


>ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = +2

Query: 2   CIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSACVKHNDVVMGHTAALRAIELAPE 181
           C+IDLLCRAG L+EA   +R++PL PDVLIW  +LSAC  + +V +        +EL  +
Sbjct: 447 CMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQ 506

Query: 182 DSSCYVLLSNIYAKQGRWDDVSKVRSMMKKRGVRK 286
           DS  YVLLSNIYA   RWDDV++VR +MK +G+RK
Sbjct: 507 DSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRK 541


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/95 (49%), Positives = 73/95 (76%)
 Frame = +2

Query: 2   CIIDLLCRAGRLEEALGVMRDLPLEPDVLIWKNILSACVKHNDVVMGHTAALRAIELAPE 181
           C++DLL RAG+++EA G ++ +P+EP+  +W  +LSAC  ++++++G  AA +  +L PE
Sbjct: 448 CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPE 507

Query: 182 DSSCYVLLSNIYAKQGRWDDVSKVRSMMKKRGVRK 286
            S  YVLLSNIYAK GRW+DV+ VRS+MK +G++K
Sbjct: 508 QSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKK 542


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