BLASTX nr result

ID: Glycyrrhiza23_contig00028108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028108
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    79   5e-13
gb|ABD32616.1| reverse transcriptase - beet retrotransposon, put...    77   1e-12
ref|XP_003631159.1| hypothetical protein MTR_8g107780 [Medicago ...    77   1e-12
ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786...    75   4e-12
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    75   5e-12

>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +1

Query: 34   LVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQERRGVSS-GYGRREI 210
            +VNVY+PC+  NK+ LW+ L   K +    LWC+ GDFN+V +  ER G+S  G   R I
Sbjct: 1477 IVNVYAPCDSQNKRLLWESLRQQKILCPNVLWCLMGDFNSVRNPSERVGLSQRGVDDRLI 1536

Query: 211  GGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
              FN +I+++ + + P +G+KFTW+  +G A+S
Sbjct: 1537 REFNDWIADLEVEEPPCVGRKFTWFRPNGAARS 1569


>gb|ABD32616.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 258

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   ARKRN-STDVLFLVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQERR 177
           ARK+  S +  +L N+Y+PC+   +K LW  L    +   G   CV GDFN V   +ERR
Sbjct: 68  ARKQGQSNEEFYLFNIYAPCDRAAQKLLWDSLSLRLQQLRGRKVCVCGDFNDVWCSEERR 127

Query: 178 GVSSGYGRREIGGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
            V+  +   +   FN FI + +L D+P+ G+KFTW+ GDG + S
Sbjct: 128 SVNVRHSSLDFSHFNSFIGDNSLHDLPLGGRKFTWFKGDGRSMS 171


>ref|XP_003631159.1| hypothetical protein MTR_8g107780 [Medicago truncatula]
           gi|355525181|gb|AET05635.1| hypothetical protein
           MTR_8g107780 [Medicago truncatula]
          Length = 617

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/98 (42%), Positives = 56/98 (57%)
 Frame = +1

Query: 16  STDVLFLVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQERRGVSSGY 195
           S +   L+NVY+PC+   ++ LW+ L        G   CV GDFNAV + +ERR VS   
Sbjct: 501 SDEEFHLLNVYAPCDNRARRVLWESLSLRLGPLRGTHVCVCGDFNAVRNREERRIVSDHG 560

Query: 196 GRREIGGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
           G  +   FNQFI    L D+P+ GK FTW+ GDG + S
Sbjct: 561 GFSDGDHFNQFIVNNFLCDLPLCGKNFTWFKGDGRSMS 598


>ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max]
          Length = 3007

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = +1

Query: 34   LVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQERRGVSSGYGRRE-- 207
            ++N+YSPC+  +K+ LW+ +   K    G  WCV GDFN +    ER   S G G  +  
Sbjct: 1651 IINIYSPCSLQDKRLLWERIKQLKTQNPGGYWCVLGDFNNIRVAAERVSTSQG-GTTDGS 1709

Query: 208  IGGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
            I  FN++I EM + +VP +GK FTW+  +G  KS
Sbjct: 1710 IRDFNEWIDEMEVEEVPWVGKSFTWFKPNGKVKS 1743


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +1

Query: 34   LVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQERRGVSS-GYGRREI 210
            +VN+Y+PC+   K+ LW +L   K      LWC  GDFN+V   +ER  +S       + 
Sbjct: 749  IVNIYAPCDLAGKRTLWNELRHLKAANPTGLWCFLGDFNSVRSQEERISLSQRSVVSADS 808

Query: 211  GGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
              FN +ISE++L D+  LG  FTW+  +G+AKS
Sbjct: 809  SEFNDWISELDLHDIRCLGSNFTWFRPNGSAKS 841



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/97 (42%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
 Frame = +1

Query: 34   LVNVYSPCNWDNKKELWKDLLWCKRVFGGDLWCVAGDFNAVSDLQER-----RGVSSGYG 198
            +VNVY+PC+   K+ LW DL   K      LWC  GDFN     +ER     R V + Y 
Sbjct: 2366 IVNVYAPCDLAGKRILWDDLRQLKASNPTGLWCFLGDFNTTRSQEERISLSQRSVVTSY- 2424

Query: 199  RREIGGFNQFISEMNLIDVPVLGKKFTWWSGDGNAKS 309
                  FN +ISEM L D+  LG  FTW+  +G+AKS
Sbjct: 2425 ---TADFNDWISEMELHDIRCLGSNFTWFRPNGSAKS 2458


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