BLASTX nr result

ID: Glycyrrhiza23_contig00028104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028104
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631155.1| Pentatricopeptide repeat-containing protein ...   172   3e-41
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
emb|CBI35295.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]   152   2e-35

>ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525177|gb|AET05631.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/90 (90%), Positives = 87/90 (96%)
 Frame = +1

Query: 1   ADSSFVLQDVEEEEKEQILLYHSEKIATAFGILNTSPSNHILVTKNLRICVDCHTAIKFM 180
           ADSSFVL DVEEEEKEQILLYHSEK+A AFGILNTSPS+ ILVTKNLRICVDCH+AIKF+
Sbjct: 696 ADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFI 755

Query: 181 TLLTKREITVRDASRFHHFKNGICNCQDFW 270
           TLLT+REITVRDASRFHHFK+GICNCQDFW
Sbjct: 756 TLLTEREITVRDASRFHHFKDGICNCQDFW 785


>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  157 bits (396), Expect = 1e-36
 Identities = 70/90 (77%), Positives = 83/90 (92%)
 Frame = +1

Query: 1   ADSSFVLQDVEEEEKEQILLYHSEKIATAFGILNTSPSNHILVTKNLRICVDCHTAIKFM 180
           A+SS+V QDVEEEEKE++LLYHSEK+A AFGIL+ SP  HI+VTKNLR+C DCHTAIKF+
Sbjct: 710 AESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFI 769

Query: 181 TLLTKREITVRDASRFHHFKNGICNCQDFW 270
           +L+TKR+ITVRDASRFHHFK+GICNC DFW
Sbjct: 770 SLVTKRDITVRDASRFHHFKDGICNCGDFW 799


>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/90 (81%), Positives = 78/90 (86%)
 Frame = +1

Query: 1   ADSSFVLQDVEEEEKEQILLYHSEKIATAFGILNTSPSNHILVTKNLRICVDCHTAIKFM 180
           A+ SFV QDVEEEEKEQILLYHSEK+A AFGILN      ILVTKNLR+C DCHTAIKFM
Sbjct: 556 AECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFM 615

Query: 181 TLLTKREITVRDASRFHHFKNGICNCQDFW 270
           TL+TKREITVRDA+RFHHFKNG CNC DFW
Sbjct: 616 TLITKREITVRDANRFHHFKNGTCNCGDFW 645


>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/90 (81%), Positives = 78/90 (86%)
 Frame = +1

Query: 1   ADSSFVLQDVEEEEKEQILLYHSEKIATAFGILNTSPSNHILVTKNLRICVDCHTAIKFM 180
           A+ SFV QDVEEEEKEQILLYHSEK+A AFGILN      ILVTKNLR+C DCHTAIKFM
Sbjct: 696 AECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFM 755

Query: 181 TLLTKREITVRDASRFHHFKNGICNCQDFW 270
           TL+TKREITVRDA+RFHHFKNG CNC DFW
Sbjct: 756 TLITKREITVRDANRFHHFKNGTCNCGDFW 785


>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/90 (78%), Positives = 77/90 (85%)
 Frame = +1

Query: 1   ADSSFVLQDVEEEEKEQILLYHSEKIATAFGILNTSPSNHILVTKNLRICVDCHTAIKFM 180
           A+ SFV QDVEEEEKEQILLYHSEK+A AFGILN      ILVTKNLR+C DCH AIKFM
Sbjct: 696 AECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFM 755

Query: 181 TLLTKREITVRDASRFHHFKNGICNCQDFW 270
           T++TKREITVRDA+RFHHFKNG CNC DFW
Sbjct: 756 TVITKREITVRDANRFHHFKNGTCNCGDFW 785


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