BLASTX nr result
ID: Glycyrrhiza23_contig00028087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00028087
(822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig... 434 e-120
ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig... 431 e-119
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi... 407 e-111
ref|XP_002520151.1| protein with unknown function [Ricinus commu... 357 2e-96
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2... 352 4e-95
>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 434 bits (1117), Expect = e-120
Identities = 208/246 (84%), Positives = 225/246 (91%)
Frame = -2
Query: 743 QQSKMAEKEDEKDQSEERVWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGA 564
++ K E ED+KD+SE+RVWSWGAGTEGQLGT LQDEH PQLLHQPS SSISSLACGGA
Sbjct: 2 EEPKKTENEDDKDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGA 61
Query: 563 HVIALTSAGKVLSWGRGNSGQLGHGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSD 384
HVIALTSAGKVLSWGRGNSGQLGHG VV+N LYPKAVTSLDGYFITHVSAGW HSGFVSD
Sbjct: 62 HVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSD 121
Query: 383 SGDLFTCGDGSFGQLGHGDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVY 204
+G +FTCGDGSFGQLGHGD+ASHCSP++VS FVDQHV QVACGMRHSLVLLKG NQVY
Sbjct: 122 NGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKG---NQVY 178
Query: 203 GFGSGKRGQLGVSKDRIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGF 24
GFGSGKRGQLGVS DR+KS+N+PKVVSGFE VE+ GIAANGDHSAAVSVDGH+YTWGRGF
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGF 238
Query: 23 KGSEDS 6
KG ED+
Sbjct: 239 KGFEDA 244
Score = 79.7 bits (195), Expect = 7e-13
Identities = 66/236 (27%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
V++ G G+ GQLG G P + + +ACG H + L +V +G G
Sbjct: 125 VFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGK 184
Query: 509 SGQLG-HGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDGSFGQLGH 333
GQLG + V +V PK V+ +G I ++A HS VS G ++T G G G
Sbjct: 185 RGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGF--E 242
Query: 332 GDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGSGKRGQLGVSKD-- 159
C ++F +VA G H+L + ++ + G LGV D
Sbjct: 243 DARVPQCLNSSLNF------TKVALGWNHALAMSGEGEVCMLGG------NHLGVLSDLQ 290
Query: 158 ---------RIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKG 18
++ +NL KV G + ++ IA +HS V+ G + TWG G G
Sbjct: 291 NISPAKHLPHLREVNLEKV-PGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHG 345
Score = 65.5 bits (158), Expect = 1e-08
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
V++WG G +G +D +PQ L+ S + + +A G H +A++ G+V G +
Sbjct: 231 VYTWGRGFKG------FEDARVPQCLN--SSLNFTKVALGWNHALAMSGEGEVCMLGGNH 282
Query: 509 SGQLGHGEVVNNVLYP--------KAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDG 354
G L + ++ + + V LDG IT ++ G HS V++ G++ T G G
Sbjct: 283 LGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWG 342
Query: 353 SFGQLGHGDYASHCSPIRVSFFVDQHVAQ---VACG 255
GQLG GD SP+ VS D + A V CG
Sbjct: 343 EHGQLGLGDTRDRISPVTVSLGYDLNEAASVIVFCG 378
>ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 431 bits (1109), Expect = e-119
Identities = 207/247 (83%), Positives = 224/247 (90%)
Frame = -2
Query: 743 QQSKMAEKEDEKDQSEERVWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGA 564
++ E ED++D+SE+RVWSWGAGTEGQLGT LQDEH PQLLHQ S SSISSLACGGA
Sbjct: 2 EEPNKTENEDDRDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGA 61
Query: 563 HVIALTSAGKVLSWGRGNSGQLGHGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSD 384
HVIALTSAGK LSWGRGNSGQLGHGEVV+N LYPKAVTSLDGYFITHVSAGWSHSGFVSD
Sbjct: 62 HVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSD 121
Query: 383 SGDLFTCGDGSFGQLGHGDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVY 204
+G +FTCGDGSFGQLGHGD ASHCSP++VS FVD HVAQVACGMRHSLVLLKG NQVY
Sbjct: 122 TGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKG---NQVY 178
Query: 203 GFGSGKRGQLGVSKDRIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGF 24
GFGSGKRGQLGVS DR+KS+N+PKVVSGFE VE+VG AANGDHSAAVSVDGH+YTWGRGF
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGF 238
Query: 23 KGSEDSH 3
KG ED+H
Sbjct: 239 KGFEDAH 245
Score = 82.0 bits (201), Expect = 1e-13
Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
V++ G G+ GQLG G P + ++ +ACG H + L +V +G G
Sbjct: 125 VFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGK 184
Query: 509 SGQLG-HGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDGSFGQLGH 333
GQLG + V +V PK V+ +G I +A HS VS G ++T G G G
Sbjct: 185 RGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF--E 242
Query: 332 GDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGSGKRGQL------G 171
+ C ++F +VA G H+L + G+ +VY G G L G
Sbjct: 243 DAHVPQCLNSSLNF------TKVALGWNHALAM-SGE--GEVYMLGGNHLGVLSDLQNIG 293
Query: 170 VSKD--RIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKG 18
+K ++ NL KV G + ++ IAA +HS V+ G + TWG G G
Sbjct: 294 PAKHFPDLREFNLEKV-PGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHG 345
Score = 70.5 bits (171), Expect = 4e-10
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
V++WG G +G +D H+PQ L+ S + + +A G H +A++ G+V G +
Sbjct: 231 VYTWGRGFKG------FEDAHVPQCLN--SSLNFTKVALGWNHALAMSGEGEVYMLGGNH 282
Query: 509 SGQLGHGEVVNNVLY--------PKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDG 354
G L + + + + V LDG IT ++AG HS V++ G++ T G G
Sbjct: 283 LGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWG 342
Query: 353 SFGQLGHGDYASHCSPIRVSFFVDQHVA---QVACG 255
GQLG GD SP+ VS D + A +V CG
Sbjct: 343 EHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCG 378
>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355514908|gb|AES96531.1| RCC1 and BTB
domain-containing protein [Medicago truncatula]
Length = 615
Score = 407 bits (1045), Expect = e-111
Identities = 206/286 (72%), Positives = 228/286 (79%), Gaps = 34/286 (11%)
Frame = -2
Query: 758 MEETEQQSKMAEKEDEKDQSE--ERVWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSIS 585
+++TE +S++ E+ ++ E ER+WSWGAGT+GQLGTGRLQDE +PQ L PS +S
Sbjct: 188 IDKTESESRLMEESEQVKIEEKIERLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPS-VS 246
Query: 584 SLACGGAHVIALTSA--------------------------------GKVLSWGRGNSGQ 501
SLACGGAHVIALTSA GKVLSWGRGNSGQ
Sbjct: 247 SLACGGAHVIALTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQ 306
Query: 500 LGHGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDGSFGQLGHGDYA 321
LGHGEVVNN+LYPKA+TSLD YFITHVSAGW HSGFVSDSG LFTCGDGSFGQLGHGDYA
Sbjct: 307 LGHGEVVNNLLYPKAITSLDNYFITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYA 366
Query: 320 SHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGSGKRGQLGVSKDRIKSIN 141
SH SPI+VS FVDQ+VAQVACGMRHSLVLLKG NQVYGFGSGKRGQLGVSKD+IKSIN
Sbjct: 367 SHSSPIKVSSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSIN 426
Query: 140 LPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKGSEDSH 3
LPKV+SGFED E+VGI+ANGDHSAA+SVDGHLYTWGRGFKG EDSH
Sbjct: 427 LPKVISGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSH 472
Score = 72.8 bits (177), Expect = 9e-11
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
+++WG G +G +D HLPQ L+ S S + + G H +A+T GKV G +
Sbjct: 458 LYTWGRGFKGY------EDSHLPQCLN--STSKFTKVTLGWNHALAMTGEGKVYMLGGNH 509
Query: 509 SGQLG--HGEVVNNVLYP------KAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDG 354
G L H L+ + LDG IT ++ G HS V+++G++ T G G
Sbjct: 510 LGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLVTENGEIKTWGWG 569
Query: 353 SFGQLGHGDYASHCSPIRVSFFVDQHVA---QVACGMRHSLVLLK 228
GQLG GD SP+ V+ D + A +V CG + L K
Sbjct: 570 EHGQLGLGDDGDRISPVTVNLGYDLNEAASIRVYCGSGFTFALTK 614
Score = 70.1 bits (170), Expect = 6e-10
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 12/236 (5%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTS---AGKVLSWG 519
+++ G G+ GQLG G P + +++ +ACG H + L + +V +G
Sbjct: 349 LFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFG 408
Query: 518 RGNSGQLGHG-EVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDGSFGQ 342
G GQLG + + ++ PK ++ + I +SA HS +S G L+T G G G
Sbjct: 409 SGKRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGY 468
Query: 341 LGHGDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGSGKRGQLG--- 171
+ C F +V G H+L + G+ +VY G G L
Sbjct: 469 --EDSHLPQCLNSTSKF------TKVTLGWNHALAMT-GE--GKVYMLGGNHLGVLSDLH 517
Query: 170 -----VSKDRIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKG 18
S + NL K G + ++ IA +HS V+ +G + TWG G G
Sbjct: 518 NARPAKSLFDSREANLEKA-PGLDGTKITDIATGAEHSVLVTENGEIKTWGWGEHG 572
>ref|XP_002520151.1| protein with unknown function [Ricinus communis]
gi|223540643|gb|EEF42206.1| protein with unknown
function [Ricinus communis]
Length = 387
Score = 357 bits (916), Expect = 2e-96
Identities = 173/249 (69%), Positives = 207/249 (83%), Gaps = 3/249 (1%)
Frame = -2
Query: 746 EQQSKMAEKEDEKDQSEERVWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPS--SISSLAC 573
E+ K+ KE E+ + E++VWSWGAGT+GQLGTG+L+DEHLPQLL PS S ISSLAC
Sbjct: 3 EENKKVKVKETEEREHEQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLAC 62
Query: 572 GGAHVIALTSA-GKVLSWGRGNSGQLGHGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSG 396
GGAHVIAL S GKVL+WGRG SGQLGHG ++++V +P+ VT LD + ITH+SAGWSHSG
Sbjct: 63 GGAHVIALNSGDGKVLTWGRGTSGQLGHGNMLSSV-HPQPVTFLDSFVITHISAGWSHSG 121
Query: 395 FVSDSGDLFTCGDGSFGQLGHGDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQL 216
FVSD G +FTCGDGSFGQLGHGD SH +P++VS+F ++HV Q+ACGMRHSLVLLKG
Sbjct: 122 FVSDKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKG--- 178
Query: 215 NQVYGFGSGKRGQLGVSKDRIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTW 36
NQVYGFGSGKRGQLG+SKD+IKSI+LP V GFED+++ I NGDHSAA+SVDGHLYTW
Sbjct: 179 NQVYGFGSGKRGQLGISKDKIKSISLPLVTCGFEDIKINSIITNGDHSAALSVDGHLYTW 238
Query: 35 GRGFKGSED 9
GRGF G+ D
Sbjct: 239 GRGFPGTSD 247
>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
predicted protein [Populus trichocarpa]
Length = 390
Score = 352 bits (904), Expect = 4e-95
Identities = 166/243 (68%), Positives = 202/243 (83%), Gaps = 3/243 (1%)
Frame = -2
Query: 722 KEDEKDQSEERVWSWGAGTEGQLGTGRLQDEHLPQLLHQP---SPSSISSLACGGAHVIA 552
K DE++ ++++WSWGAGTEGQLGTG+L+DE+LPQLLH P S SIS+LACGGAHVIA
Sbjct: 5 KRDEEESKQQQIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIA 64
Query: 551 LTSAGKVLSWGRGNSGQLGHGEVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDL 372
LTS G+V +WGRG +GQLGHGE++N+ L+PK V+SL ITHVSAGWSHSGFVSD G L
Sbjct: 65 LTSGGRVFTWGRGTTGQLGHGEMLNS-LHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLL 123
Query: 371 FTCGDGSFGQLGHGDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGS 192
FTCGDGSFGQLG G+Y S +P++V +F + V Q+ACGMRHSLVLL G NQVYGFGS
Sbjct: 124 FTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLNG---NQVYGFGS 180
Query: 191 GKRGQLGVSKDRIKSINLPKVVSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKGSE 12
GKRGQLG+S+D+ KSINLP+V G EDV++V I+ANGDHSAA+S DGHLYTWGRGF G+
Sbjct: 181 GKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFAGAS 240
Query: 11 DSH 3
D++
Sbjct: 241 DAN 243
Score = 73.6 bits (179), Expect = 5e-11
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 9/233 (3%)
Frame = -2
Query: 689 VWSWGAGTEGQLGTGRLQDEHLPQLLHQPSPSSISSLACGGAHVIALTSAGKVLSWGRGN 510
+++ G G+ GQLG G + + P + + + ++ +ACG H + L + +V +G G
Sbjct: 123 LFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGK 182
Query: 509 SGQLGHG-EVVNNVLYPKAVTSLDGYFITHVSAGWSHSGFVSDSGDLFTCGDGSFGQLGH 333
GQLG + ++ P+ L+ I +SA HS +S G L+T G G G
Sbjct: 183 RGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFAGASDA 242
Query: 332 GDYASHCSPIRVSFFVDQHVAQVACGMRHSLVLLKGDQLNQVYGFGSGKRGQL----GVS 165
S +R + + A G H L LL GD+ +V G G L +S
Sbjct: 243 NFPQLSLSSLRCT--------KAALGWNHGL-LLTGDE--EVLMLGGNYHGVLCDLEKMS 291
Query: 164 KDRIKSINLPKV----VSGFEDVEVVGIAANGDHSAAVSVDGHLYTWGRGFKG 18
+ + + P V G + V+VV IAA +HSA TWG G G
Sbjct: 292 AVKHRPEDSPGTALNEVIGLDGVKVVKIAAGAEHSA--------LTWGWGEHG 336