BLASTX nr result

ID: Glycyrrhiza23_contig00028063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028063
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597656.1| DNA repair protein radA-like protein [Medica...   304   6e-81
ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [...   290   9e-77
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   260   1e-67
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   257   1e-66
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-66

>ref|XP_003597656.1| DNA repair protein radA-like protein [Medicago truncatula]
            gi|355486704|gb|AES67907.1| DNA repair protein radA-like
            protein [Medicago truncatula]
          Length = 646

 Score =  304 bits (779), Expect = 6e-81
 Identities = 154/189 (81%), Positives = 171/189 (90%)
 Frame = -1

Query: 577  QAVSNASEMFLTEQDSDSDVLVGLAFTVIMDGSRTFVIEIQALCLSHCPVSVSASKIVNG 398
            +AVSNA+EMFLTEQD+DSDVLVGLAFTVIMDGSRTF+IE+QALCLS  PV  S S++VNG
Sbjct: 456  KAVSNATEMFLTEQDADSDVLVGLAFTVIMDGSRTFIIEVQALCLSQSPVGGSTSRVVNG 515

Query: 397  IETNRANMIKCVLIKQAGLHLQENAVYLNVVSGLTLTETAGDLAIAAAICSSFLEFPIPK 218
            I+T+RANMIKCVLIKQAGLH+  N+V+LNVVSGL +TETAGDLAIAAAICSSFLE+PIPK
Sbjct: 516  IDTDRANMIKCVLIKQAGLHIPVNSVHLNVVSGLKMTETAGDLAIAAAICSSFLEYPIPK 575

Query: 217  GIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGGEGLGKMKIVCCKN 38
            GIAFI EIGLSGELR VPRIDKRVHA+AKLGYK CVVPKQA K LG EGL  +K+V CKN
Sbjct: 576  GIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQALKALGTEGLENIKVVGCKN 635

Query: 37   LKEFINVVF 11
            LKEFIN VF
Sbjct: 636  LKEFINAVF 644


>ref|XP_003546961.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 585

 Score =  290 bits (743), Expect = 9e-77
 Identities = 148/189 (78%), Positives = 165/189 (87%)
 Frame = -1

Query: 577 QAVSNASEMFLTEQDSDSDVLVGLAFTVIMDGSRTFVIEIQALCLSHCPVSVSASKIVNG 398
           Q VSNASEMFLT+Q SDS+VL GLA  VIMDGSRTF+IEIQALCL+HCPVS S S   NG
Sbjct: 396 QVVSNASEMFLTQQHSDSNVLAGLAIAVIMDGSRTFLIEIQALCLTHCPVSSSLS---NG 452

Query: 397 IETNRANMIKCVLIKQAGLHLQENAVYLNVVSGLTLTETAGDLAIAAAICSSFLEFPIPK 218
           I  N+AN+IKCVLIKQ GLHLQ+NAV+LNVVSG+T+TETAGDLAIAAAICSSFLEFPIP+
Sbjct: 453 INANKANIIKCVLIKQTGLHLQDNAVFLNVVSGMTVTETAGDLAIAAAICSSFLEFPIPE 512

Query: 217 GIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGGEGLGKMKIVCCKN 38
           G AFI EIGL GELRMVPRI+KRV+ + KLGY+MCVVPKQAEK L  EGLGKMK+V CK+
Sbjct: 513 GTAFIGEIGLGGELRMVPRIEKRVNTLVKLGYRMCVVPKQAEKLLETEGLGKMKVVGCKD 572

Query: 37  LKEFINVVF 11
           LKE IN VF
Sbjct: 573 LKEVINAVF 581


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355521082|gb|AET01536.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 643

 Score =  260 bits (665), Expect = 1e-67
 Identities = 137/189 (72%), Positives = 156/189 (82%)
 Frame = -1

Query: 577 QAVSNASEMFLTEQDSDSDVLVGLAFTVIMDGSRTFVIEIQALCLSHCPVSVSASKIVNG 398
           QAVSNASEMFL+EQD DSDVL GLA  VIMDGSRTF+IEIQALCLS      + S+  NG
Sbjct: 369 QAVSNASEMFLSEQDLDSDVLAGLAVAVIMDGSRTFLIEIQALCLS----GSTGSRQFNG 424

Query: 397 IETNRANMIKCVLIKQAGLHLQENAVYLNVVSGLTLTETAGDLAIAAAICSSFLEFPIPK 218
           I+ NRA+MI  VLIKQAGL LQE+AV+LNVVSGLT+TETAGDLAIAAAICSS LE PIP 
Sbjct: 425 IQANRADMIISVLIKQAGLRLQEHAVFLNVVSGLTVTETAGDLAIAAAICSSCLELPIPN 484

Query: 217 GIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGGEGLGKMKIVCCKN 38
            IAFI EIGL GELRMV R++KRVH VAKLGY+MC++PK AEK LG EGL  +K+V C+N
Sbjct: 485 DIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRMCIIPKAAEKVLGTEGLENIKVVGCRN 544

Query: 37  LKEFINVVF 11
           LK+ IN +F
Sbjct: 545 LKDVINTIF 553


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  257 bits (656), Expect = 1e-66
 Identities = 138/189 (73%), Positives = 156/189 (82%)
 Frame = -1

Query: 577 QAVSNASEMFLTEQDSDSDVLVGLAFTVIMDGSRTFVIEIQALCLSHCPVSVSASKIVNG 398
           QAVSNASEMFL+EQ  DS++L GLA  VIMDGSRTF+IEIQALCLS      + S+ VNG
Sbjct: 370 QAVSNASEMFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLS----GSTGSRQVNG 425

Query: 397 IETNRANMIKCVLIKQAGLHLQENAVYLNVVSGLTLTETAGDLAIAAAICSSFLEFPIPK 218
           I+  RA+MI  VLIKQAGL LQE+AV+LNVVSGL LTETAGDLAIAAAICSS LE PIP 
Sbjct: 426 IQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLAIAAAICSSCLEIPIPN 485

Query: 217 GIAFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGGEGLGKMKIVCCKN 38
            IAFI EIGL GELRMVPR++KRV+ VAKLGY+MC+VPK AEK LG EGL KM++V C+N
Sbjct: 486 DIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGLEKMEVVGCRN 545

Query: 37  LKEFINVVF 11
           LKE IN VF
Sbjct: 546 LKEVINTVF 554


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  256 bits (655), Expect = 1e-66
 Identities = 136/189 (71%), Positives = 154/189 (81%)
 Frame = -1

Query: 571 VSNASEMFLTEQDSDSDVLVGLAFTVIMDGSRTFVIEIQALCLSHCPVSVSASKIVNGIE 392
           VSN SE+FLTEQ SDSD L GLA  VIMDGSR+F+IEIQALC+S      S S+ +NGI+
Sbjct: 341 VSNPSEIFLTEQHSDSDFLAGLAVAVIMDGSRSFLIEIQALCVS----GSSVSRHINGIQ 396

Query: 391 TNRANMIKCVLIKQAGLHLQENAVYLNVVSGLTLTETAGDLAIAAAICSSFLEFPIPKGI 212
           ++RA+MI  VLIKQAGL LQENA++LNVVSG+ LTETAGD+AIAAAICSSFLEFPIP  I
Sbjct: 397 SSRADMIISVLIKQAGLMLQENAIFLNVVSGVMLTETAGDVAIAAAICSSFLEFPIPNNI 456

Query: 211 AFIAEIGLSGELRMVPRIDKRVHAVAKLGYKMCVVPKQAEKFLGGEGLGKMKIVCCKNLK 32
           AFI EIGL GELR VPR++KRVH VAKLGYKMCV+PK AEK L   G   MKIV CKNLK
Sbjct: 457 AFIGEIGLGGELRAVPRMEKRVHTVAKLGYKMCVIPKSAEKSLANLGFQGMKIVGCKNLK 516

Query: 31  EFINVVFKS 5
           E IN VFK+
Sbjct: 517 EVINTVFKA 525


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