BLASTX nr result

ID: Glycyrrhiza23_contig00028049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028049
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237168.1| WD-repeat cell cycle regulatory protein [Gly...   249   1e-64
ref|XP_003552875.1| PREDICTED: protein FIZZY-RELATED 3-like [Gly...   247   6e-64
gb|AAQ72359.1| B-type cell cycle switch protein ccs52B [Medicago...   247   6e-64
gb|AFK39458.1| unknown [Lotus japonicus]                              246   1e-63
ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communi...   243   9e-63

>ref|NP_001237168.1| WD-repeat cell cycle regulatory protein [Glycine max]
           gi|42362327|gb|AAS13372.1| WD-repeat cell cycle
           regulatory protein [Glycine max]
          Length = 483

 Score =  249 bits (637), Expect = 1e-64
 Identities = 117/120 (97%), Positives = 117/120 (97%)
 Frame = +2

Query: 2   TADRCIRFWNTTNGHQSNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 181
           TADRCIRFWNTTNGHQ NCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSL KV
Sbjct: 364 TADRCIRFWNTTNGHQLNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLTKV 423

Query: 182 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 361
           ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMK PAPVKDTGLWSLGRTQIR
Sbjct: 424 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKAPAPVKDTGLWSLGRTQIR 483


>ref|XP_003552875.1| PREDICTED: protein FIZZY-RELATED 3-like [Glycine max]
          Length = 489

 Score =  247 bits (631), Expect = 6e-64
 Identities = 115/120 (95%), Positives = 117/120 (97%)
 Frame = +2

Query: 2   TADRCIRFWNTTNGHQSNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 181
           TADRCIRFWNTTNGHQ NC+DTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSL+KV
Sbjct: 370 TADRCIRFWNTTNGHQLNCLDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLSKV 429

Query: 182 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 361
           ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMK P PVKDTGLWSLGRTQIR
Sbjct: 430 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKAPVPVKDTGLWSLGRTQIR 489


>gb|AAQ72359.1| B-type cell cycle switch protein ccs52B [Medicago truncatula]
          Length = 471

 Score =  247 bits (631), Expect = 6e-64
 Identities = 117/120 (97%), Positives = 117/120 (97%)
 Frame = +2

Query: 2   TADRCIRFWNTTNGHQSNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 181
           T DRCIRFWNTTNGHQ N VDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV
Sbjct: 352 TPDRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 411

Query: 182 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 361
           ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR
Sbjct: 412 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 471


>gb|AFK39458.1| unknown [Lotus japonicus]
          Length = 229

 Score =  246 bits (629), Expect = 1e-63
 Identities = 116/120 (96%), Positives = 118/120 (98%)
 Frame = +2

Query: 2   TADRCIRFWNTTNGHQSNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 181
           TADRCIRFWNTTNGHQ N VDTGSQVCNLAWSKNVNE+VSTHGYSQNQIMVWKYPSL+KV
Sbjct: 110 TADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMVWKYPSLSKV 169

Query: 182 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 361
           ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR
Sbjct: 170 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 229


>ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communis]
           gi|223528800|gb|EEF30806.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 493

 Score =  243 bits (621), Expect = 9e-63
 Identities = 115/120 (95%), Positives = 116/120 (96%)
 Frame = +2

Query: 2   TADRCIRFWNTTNGHQSNCVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 181
           TADRCIRFWNTTNGHQ N VDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV
Sbjct: 374 TADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKV 433

Query: 182 ATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR 361
           ATLTGHS+RVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMK PAPVKDTGLWSLGRT IR
Sbjct: 434 ATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKAPAPVKDTGLWSLGRTHIR 493


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