BLASTX nr result

ID: Glycyrrhiza23_contig00028046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028046
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog ...   236   1e-60
ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medic...   221   4e-56
emb|CBI16239.3| unnamed protein product [Vitis vinifera]              214   6e-54
ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...   214   6e-54
emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera]   214   6e-54

>ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Glycine max]
          Length = 378

 Score =  236 bits (602), Expect = 1e-60
 Identities = 119/127 (93%), Positives = 122/127 (96%)
 Frame = -3

Query: 381 ARNIITAKDALSLTEFELMELLDVGMAEVTSAMAHISEVVCPPCQTALLLMEQRVRNESL 202
           ARNIITAKDALS TEFELMELLDVG  EVTSAMAH+SEVVCPPCQTALLL+EQRV NESL
Sbjct: 21  ARNIITAKDALSHTEFELMELLDVGKEEVTSAMAHVSEVVCPPCQTALLLLEQRVLNESL 80

Query: 201 AGHLPTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPSNCGGLDGRVI 22
           AGHL TRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLP+NCGGLDGRVI
Sbjct: 81  AGHLSTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVI 140

Query: 21  YIDVESK 1
           YIDVESK
Sbjct: 141 YIDVESK 147


>ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355486184|gb|AES67387.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 484

 Score =  221 bits (564), Expect = 4e-56
 Identities = 114/127 (89%), Positives = 118/127 (92%)
 Frame = -3

Query: 381 ARNIITAKDALSLTEFELMELLDVGMAEVTSAMAHISEVVCPPCQTALLLMEQRVRNESL 202
           ARNIITAKDALSLTEFELMELLDVGM+EVTSAMAHISE+VCPPCQT      QRVRNESL
Sbjct: 21  ARNIITAKDALSLTEFELMELLDVGMSEVTSAMAHISELVCPPCQT------QRVRNESL 74

Query: 201 AGHLPTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPSNCGGLDGRVI 22
           AGHLPT+LKGLDEALCGGIPFGV+TELVGP GIGKTQFCLKLSLLASLP N GGLDGRVI
Sbjct: 75  AGHLPTQLKGLDEALCGGIPFGVVTELVGPPGIGKTQFCLKLSLLASLPVNYGGLDGRVI 134

Query: 21  YIDVESK 1
           YIDVESK
Sbjct: 135 YIDVESK 141


>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  214 bits (545), Expect = 6e-54
 Identities = 110/127 (86%), Positives = 117/127 (92%)
 Frame = -3

Query: 381 ARNIITAKDALSLTEFELMELLDVGMAEVTSAMAHISEVVCPPCQTALLLMEQRVRNESL 202
           ARNI TAK+ALSLTEFELMELLDVGMA VTSA+AHISE+V PP QTAL LMEQRV+NE +
Sbjct: 21  ARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIVSPPTQTALSLMEQRVQNEYM 80

Query: 201 AGHLPTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPSNCGGLDGRVI 22
           AGHLPTRLKGLDEAL GGIPFGVLTELVGP GIGKTQFCLKLSLLASLP++ GGLDGRVI
Sbjct: 81  AGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVI 140

Query: 21  YIDVESK 1
           YID ESK
Sbjct: 141 YIDAESK 147


>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score =  214 bits (545), Expect = 6e-54
 Identities = 110/127 (86%), Positives = 117/127 (92%)
 Frame = -3

Query: 381 ARNIITAKDALSLTEFELMELLDVGMAEVTSAMAHISEVVCPPCQTALLLMEQRVRNESL 202
           ARNI TAK+ALSLTEFELMELLDVGMA VTSA+AHISE+V PP QTAL LMEQRV+NE +
Sbjct: 21  ARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIVSPPTQTALSLMEQRVQNEYM 80

Query: 201 AGHLPTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPSNCGGLDGRVI 22
           AGHLPTRLKGLDEAL GGIPFGVLTELVGP GIGKTQFCLKLSLLASLP++ GGLDGRVI
Sbjct: 81  AGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVI 140

Query: 21  YIDVESK 1
           YID ESK
Sbjct: 141 YIDAESK 147


>emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera]
          Length = 453

 Score =  214 bits (545), Expect = 6e-54
 Identities = 110/127 (86%), Positives = 117/127 (92%)
 Frame = -3

Query: 381 ARNIITAKDALSLTEFELMELLDVGMAEVTSAMAHISEVVCPPCQTALLLMEQRVRNESL 202
           ARNI TAK+ALSLTEFELMELLDVGMA VTSA+AHISE+V PP QTAL LMEQRV+NE +
Sbjct: 21  ARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIVSPPTQTALSLMEQRVQNEYM 80

Query: 201 AGHLPTRLKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPSNCGGLDGRVI 22
           AGHLPTRLKGLDEAL GGIPFGVLTELVGP GIGKTQFCLKLSLLASLP++ GGLDGRVI
Sbjct: 81  AGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVI 140

Query: 21  YIDVESK 1
           YID ESK
Sbjct: 141 YIDAESK 147


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