BLASTX nr result

ID: Glycyrrhiza23_contig00028042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028042
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             101   1e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             101   1e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             100   2e-19
dbj|BAE71259.1| hypothetical protein [Trifolium pratense]              92   6e-17
ref|XP_002512046.1| nucleic acid binding protein, putative [Rici...    89   9e-16

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  101 bits (251), Expect = 1e-19
 Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
 Frame = -2

Query: 639  RNHFVFSGKSSIPDLILPKLFAQINLFQEHLLNHGPLFIEVSRSISIKWIPLPEGTLKLN 460
            RN  VF    + P  IL + F + +  +   L      ++ +    + W P   G  KLN
Sbjct: 1686 RNRLVFDNNITAPSDILNRSFMESS--EARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLN 1743

Query: 459  TDG---SHSHGLSACGGLLRNSLGQFVRGFHCNLGTAPSVAAELWGLVMGLRMARMVEAP 289
            +DG   SHSH L++ GGLLRN  G +V G+ CN+GTA S  AELWGL  GL +A+     
Sbjct: 1744 SDGACKSHSH-LASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFT 1802

Query: 288  SVLVELDSRVVVNMVQARRAHCSHLQPLLDEALELMSSASWSCSISHVLREANSCADVLA 109
             ++ E DS  VV +++ +    +    +L +  +L+        ++H+LRE N CAD LA
Sbjct: 1803 KLIAETDSEAVVQVLR-KDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLA 1861

Query: 108  GMGHSGSFQWT 76
             +G S S+  T
Sbjct: 1862 NLGQSSSWGTT 1872


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  101 bits (251), Expect = 1e-19
 Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
 Frame = -2

Query: 639  RNHFVFSGKSSIPDLILPKLFAQINLFQEHLLNHGPLFIEVSRSISIKWIPLPEGTLKLN 460
            RN  VF    + P  IL + F + +  +   L      ++ +    + W P   G  KLN
Sbjct: 1154 RNRLVFDNNITAPSDILNRSFMESS--EARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLN 1211

Query: 459  TDG---SHSHGLSACGGLLRNSLGQFVRGFHCNLGTAPSVAAELWGLVMGLRMARMVEAP 289
            +DG   SHSH L++ GGLLRN  G +V G+ CN+GTA S  AELWGL  GL +A+     
Sbjct: 1212 SDGACKSHSH-LASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFT 1270

Query: 288  SVLVELDSRVVVNMVQARRAHCSHLQPLLDEALELMSSASWSCSISHVLREANSCADVLA 109
             ++ E DS  VV +++ +    +    +L +  +L+        ++H+LRE N CAD LA
Sbjct: 1271 KLIAETDSEAVVQVLR-KDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLA 1329

Query: 108  GMGHSGSFQWT 76
             +G S S+  T
Sbjct: 1330 NLGQSSSWGTT 1340


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  100 bits (250), Expect = 2e-19
 Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
 Frame = -2

Query: 639  RNHFVFSGKSSIPDLILPKLFAQINLFQEHLLNHGPLFIEVSRSISIKWIPLPEGTLKLN 460
            RN  VF    + P  IL + F + +  +   L      ++ +    + W P   G  KLN
Sbjct: 1154 RNRLVFDNNITAPSDILNRSFMESS--EARCLLAKRTGLQTAFQTWVVWSPPAAGFTKLN 1211

Query: 459  TDG---SHSHGLSACGGLLRNSLGQFVRGFHCNLGTAPSVAAELWGLVMGLRMARMVEAP 289
            +DG   SHSH L++ GGLLRN  G +V G+ CN+GTA S  AELWGL  GL +A+     
Sbjct: 1212 SDGACKSHSH-LASAGGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFT 1270

Query: 288  SVLVELDSRVVVNMVQARRAHCSHLQPLLDEALELMSSASWSCSISHVLREANSCADVLA 109
             ++ E DS  VV +++ +    +    +L +  +L+        ++H+LRE N CAD LA
Sbjct: 1271 KLIAETDSEAVVQVLR-KDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLA 1329

Query: 108  GMGHSGSFQWT 76
             +G S S+  T
Sbjct: 1330 NLGQSSSWGTT 1340


>dbj|BAE71259.1| hypothetical protein [Trifolium pratense]
          Length = 553

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
 Frame = -2

Query: 639 RNHFVFSGKSSIPDLILPKLFAQINLFQEHLLNHGPLFIEVSRSISIKWIPLPEGTLKLN 460
           RN  +   + + P   +  ++ ++N + +    +  + I+    + I W P     +KLN
Sbjct: 338 RNKEIHDAEFTRPIYAMQHVYRRVNDYYQANKTNRLMRIKNDMLVYISWKPPCGSYVKLN 397

Query: 459 TDGS-HSHGLSACGGLLRNSLGQFVRGFHCNLGTAPSVAAELWGLVMGLRMARMVEAPSV 283
           TDG+        CGG++R S G+++ GF   LG   ++ AELWG+  GL  AR +   +V
Sbjct: 398 TDGACKDQNRGGCGGIIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAV 457

Query: 282 LVELDSRVVVNMVQARRAHCSHLQPLLDEALELMSSASWSCSISHVLREANSCADVLAGM 103
            + +DS VVV  ++  R   S   PL+ + +  M    W   I H  RE+N CAD +A +
Sbjct: 458 ELNVDSVVVVQAIKTGRFSSSVGLPLV-KHIRRMLDLDWEIKIEHAYRESNKCADAMANI 516

Query: 102 G 100
           G
Sbjct: 517 G 517


>ref|XP_002512046.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549226|gb|EEF50715.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 244

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
 Frame = -2

Query: 504 SIKWIPLPEGTLKLNTDGSH--SHGLSACGGLLRNSLGQFVRGFHCNLGT-APSVAAELW 334
           SI W P   G +KLNTDG+     G +A GGL+R+S G+++RGF C +G  + SV AEL 
Sbjct: 74  SISWEPPTTGCMKLNTDGAKRGEDGPAAAGGLIRDSRGRWIRGFKCYMGLGSTSVKAELL 133

Query: 333 GLVMGLRMARMVEAPSVLVELDSRVVVNMVQARRAHCSHLQPLLDEALELMSSASWSCSI 154
           GL+ GL++AR +    ++VE D+  VV M++ +    +    L  E  +L+    W   +
Sbjct: 134 GLIEGLKLARKIGCEKLIVETDNEGVVQMIKIKTNRQNDNYILASEIQQLLQK-GW--EV 190

Query: 153 SHVLREANSCADVLAGMG 100
            H   + N CAD LA  G
Sbjct: 191 QHCKNKQNRCADRLANYG 208


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