BLASTX nr result

ID: Glycyrrhiza23_contig00028038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028038
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541942.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   195   3e-48
ref|XP_003539507.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   181   6e-44
ref|XP_003597021.1| APO protein [Medicago truncatula] gi|3554860...   175   3e-42
ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like...   157   7e-37
ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_003541942.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 4, mitochondrial-like
           [Glycine max]
          Length = 395

 Score =  195 bits (496), Expect = 3e-48
 Identities = 91/106 (85%), Positives = 96/106 (90%)
 Frame = -1

Query: 320 GHLIQPCWGYKHRAKNRVHEWVKGGLNDILVPVDTFHLKNMFQSVIRHNQRFDFDRIPAV 141
           GHLIQ C GYKHRAKNRVHEW+KGGLNDILVPV+TFHL NMFQSVIRHN+RFDFDRIPAV
Sbjct: 134 GHLIQTCSGYKHRAKNRVHEWIKGGLNDILVPVETFHLDNMFQSVIRHNERFDFDRIPAV 193

Query: 140 VELCWQAGADPHDENLNSNSWNLEGANGSVHGTESLSPNDLALVAN 3
           VELCWQAGAD HDENLNS+SWNLE  NGSV  TESLSPNDL  +AN
Sbjct: 194 VELCWQAGADFHDENLNSSSWNLEADNGSVPETESLSPNDLTSIAN 239


>ref|XP_003539507.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 4, mitochondrial-like
           [Glycine max]
          Length = 377

 Score =  181 bits (459), Expect = 6e-44
 Identities = 84/106 (79%), Positives = 92/106 (86%)
 Frame = -1

Query: 320 GHLIQPCWGYKHRAKNRVHEWVKGGLNDILVPVDTFHLKNMFQSVIRHNQRFDFDRIPAV 141
           GHLIQ CWGYKH AKN VHEWVKGGLNDILVPV++FHL  MFQSVIRH++RFDFD IPAV
Sbjct: 68  GHLIQTCWGYKHCAKNWVHEWVKGGLNDILVPVESFHLDKMFQSVIRHDERFDFDHIPAV 127

Query: 140 VELCWQAGADPHDENLNSNSWNLEGANGSVHGTESLSPNDLALVAN 3
           VELCWQA  D H+ENLNS+SWNLE ANGSV G ESLSPN+L  +AN
Sbjct: 128 VELCWQARDDLHEENLNSSSWNLEVANGSVPGAESLSPNNLTSIAN 173


>ref|XP_003597021.1| APO protein [Medicago truncatula] gi|355486069|gb|AES67272.1| APO
           protein [Medicago truncatula]
          Length = 344

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/106 (81%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = -1

Query: 320 GHLIQPCWGYKHRAKNRVHEWVKGGLNDILVPVDTFHLKNMFQSVIRHNQRFDFDRIPAV 141
           GHLI  C GYK RAKNRVHEWVKGGLNDILVPV+TFHL NMFQ+VIRH+QRFDFDRI AV
Sbjct: 100 GHLIPTCRGYKRRAKNRVHEWVKGGLNDILVPVETFHLNNMFQNVIRHDQRFDFDRIAAV 159

Query: 140 VELCWQAGAD-PHDENLNSNSWNLEGANGSVHGTESLSPNDLALVA 6
           VELCWQAGAD PHDENL+ +S NLE ANG+V G ESLSPN LA+VA
Sbjct: 160 VELCWQAGADVPHDENLSPSSSNLEAANGNVDGFESLSPNVLAVVA 205


>ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like [Vitis vinifera]
          Length = 329

 Score =  157 bits (398), Expect = 7e-37
 Identities = 71/105 (67%), Positives = 86/105 (81%)
 Frame = -1

Query: 320 GHLIQPCWGYKHRAKNRVHEWVKGGLNDILVPVDTFHLKNMFQSVIRHNQRFDFDRIPAV 141
           GHLIQ C+GYK R+KN+VHEW+ G LNDILVPV+TFHL+ MFQ VI+H+QRFDFDR+PAV
Sbjct: 96  GHLIQTCYGYKRRSKNQVHEWISGSLNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAV 155

Query: 140 VELCWQAGADPHDENLNSNSWNLEGANGSVHGTESLSPNDLALVA 6
            ELC QAGAD  +ENL+S+SW  E     VHGT+SLSP++L  VA
Sbjct: 156 FELCLQAGADLDEENLSSSSWKSESTFSGVHGTKSLSPDELKFVA 200


>ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|222837351|gb|EEE75730.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/105 (61%), Positives = 78/105 (74%)
 Frame = -1

Query: 320 GHLIQPCWGYKHRAKNRVHEWVKGGLNDILVPVDTFHLKNMFQSVIRHNQRFDFDRIPAV 141
           GHLIQ C+GYK   + RVHEW+ GGLNDILVPV+TF L NMFQ VI H+QRFDFDR+PAV
Sbjct: 77  GHLIQTCYGYKRCGRKRVHEWIPGGLNDILVPVETFRLDNMFQDVIEHDQRFDFDRVPAV 136

Query: 140 VELCWQAGADPHDENLNSNSWNLEGANGSVHGTESLSPNDLALVA 6
           VELC QAGA+  DENL+    +L+G  G + G E  SP+ L  +A
Sbjct: 137 VELCRQAGANIDDENLHPGMLDLDGGIGHIDGGEPFSPSHLMYIA 181


Top