BLASTX nr result
ID: Glycyrrhiza23_contig00028006
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00028006 (444 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max] 106 2e-21 ref|XP_004138652.1| PREDICTED: 5'-3' exonuclease-like [Cucumis s... 76 3e-12 ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 gb|ABK93472.1| unknown [Populus trichocarpa] 75 6e-12 ref|XP_002526842.1| DNA polymerase I, putative [Ricinus communis... 74 1e-11 >ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max] Length = 368 Score = 106 bits (264), Expect = 2e-21 Identities = 63/113 (55%), Positives = 72/113 (63%), Gaps = 2/113 (1%) Frame = -2 Query: 335 MKTLETRLLAGAFIQPCFPCRKCNPTPSSSL-SFKTRKKITVALSXXXXXXXXXXTEPQA 159 MKTLE LLAGA++QP FPC NPT S+S + KT +TV + Q Sbjct: 1 MKTLEMSLLAGAYVQPRFPCNY-NPTLSASCRTQKTATSLTVTTPKKTEKALFTESFDQT 59 Query: 158 QXXXXXXXXK-RVFFLDVNPLCYDGSKPSLHSFARWLSLFLSQVSHSDPVIAV 3 + K RVFFLDVNPLCY+GSKPSLHS RWLSLFL QVSH+DPVIAV Sbjct: 60 RDAQPLPEKKKRVFFLDVNPLCYEGSKPSLHSLGRWLSLFLEQVSHTDPVIAV 112 >ref|XP_004138652.1| PREDICTED: 5'-3' exonuclease-like [Cucumis sativus] gi|449490129|ref|XP_004158516.1| PREDICTED: 5'-3' exonuclease-like [Cucumis sativus] Length = 377 Score = 75.9 bits (185), Expect = 3e-12 Identities = 33/42 (78%), Positives = 37/42 (88%) Frame = -2 Query: 128 RVFFLDVNPLCYDGSKPSLHSFARWLSLFLSQVSHSDPVIAV 3 RVFFLDVNPLCY GSKPSL +F RW+S+F +VSHSDPVIAV Sbjct: 86 RVFFLDVNPLCYQGSKPSLRNFGRWVSIFFEEVSHSDPVIAV 127 >ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|222835702|gb|EEE74137.1| predicted protein [Populus trichocarpa] Length = 368 Score = 75.1 bits (183), Expect = 6e-12 Identities = 35/42 (83%), Positives = 37/42 (88%) Frame = -2 Query: 128 RVFFLDVNPLCYDGSKPSLHSFARWLSLFLSQVSHSDPVIAV 3 RVFFLDVNPLCY GS PSLHSFA W+SLF SQVS +DPVIAV Sbjct: 74 RVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAV 115 >gb|ABK93472.1| unknown [Populus trichocarpa] Length = 375 Score = 75.1 bits (183), Expect = 6e-12 Identities = 35/42 (83%), Positives = 37/42 (88%) Frame = -2 Query: 128 RVFFLDVNPLCYDGSKPSLHSFARWLSLFLSQVSHSDPVIAV 3 RVFFLDVNPLCY GS PSLHSFA W+SLF SQVS +DPVIAV Sbjct: 82 RVFFLDVNPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAV 123 >ref|XP_002526842.1| DNA polymerase I, putative [Ricinus communis] gi|223533846|gb|EEF35577.1| DNA polymerase I, putative [Ricinus communis] Length = 411 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/42 (83%), Positives = 36/42 (85%) Frame = -2 Query: 128 RVFFLDVNPLCYDGSKPSLHSFARWLSLFLSQVSHSDPVIAV 3 RVFFLDVNPLCY GS PSLHSF W+SLF SQVS SDPVIAV Sbjct: 96 RVFFLDVNPLCYAGSTPSLHSFGYWISLFFSQVSLSDPVIAV 137