BLASTX nr result

ID: Glycyrrhiza23_contig00027994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027994
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   130   8e-29
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   113   2e-23
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   112   3e-23
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...   106   2e-21
emb|CBI19030.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/101 (67%), Positives = 75/101 (74%)
 Frame = +1

Query: 1   RLKAKLSAEENSRMFAGRQIHPFFSLWKVGKKSQETADSESSLSAAKSEGGRIICGPIHV 180
           RL+AKLSAEENSRMFAGRQIHPFFSL K  KK +++ DSESSLSAAK E GR  CGPIHV
Sbjct: 75  RLEAKLSAEENSRMFAGRQIHPFFSLCKAEKKFKDSGDSESSLSAAKRESGRTNCGPIHV 134

Query: 181 FEDVQXXXXXXXXXXXXFLGNTTLVDCSLESSNLSVLEGSV 303
           FED+             FLGNTT+VDCS ESS  SV+E SV
Sbjct: 135 FEDITDDTSSLDWSDWKFLGNTTIVDCSPESSKFSVMEDSV 175


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/100 (60%), Positives = 69/100 (69%)
 Frame = +1

Query: 4   LKAKLSAEENSRMFAGRQIHPFFSLWKVGKKSQETADSESSLSAAKSEGGRIICGPIHVF 183
           L+AKL+AEE+SR+FAGRQIHPFFSLWK GKK Q+ ADS S+LS  KSE  R  CGPIHVF
Sbjct: 115 LEAKLAAEEDSRIFAGRQIHPFFSLWKAGKKVQDMADSGSNLSTTKSEEERTTCGPIHVF 174

Query: 184 EDVQXXXXXXXXXXXXFLGNTTLVDCSLESSNLSVLEGSV 303
           E+ Q            FL NTT ++   E  N SVLEGSV
Sbjct: 175 ENTQDDTPSLDWRNWAFLENTTTMNYGPEILNSSVLEGSV 214


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/100 (59%), Positives = 68/100 (68%)
 Frame = +1

Query: 4   LKAKLSAEENSRMFAGRQIHPFFSLWKVGKKSQETADSESSLSAAKSEGGRIICGPIHVF 183
           L+AKL+AEE+SR+F GRQIHPFFSLWK GKK Q+ ADS S+LS  KSE  R  CGPIHVF
Sbjct: 116 LEAKLAAEEDSRIFTGRQIHPFFSLWKAGKKVQDVADSGSNLSTTKSEDERTTCGPIHVF 175

Query: 184 EDVQXXXXXXXXXXXXFLGNTTLVDCSLESSNLSVLEGSV 303
           E+ Q            FL NTT ++   ES N SVLE SV
Sbjct: 176 ENTQDDTSSLDWRNWTFLENTTSMNYGSESLNSSVLEASV 215


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355490091|gb|AES71294.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 1283

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/101 (56%), Positives = 69/101 (68%)
 Frame = +1

Query: 1   RLKAKLSAEENSRMFAGRQIHPFFSLWKVGKKSQETADSESSLSAAKSEGGRIICGPIHV 180
           RL+AKLSAEENSR+FAGR++HP FS  K GKK QE ++S  +L  AKS    I CGPIHV
Sbjct: 123 RLEAKLSAEENSRLFAGRKVHPLFSSCKAGKKVQELSESGRNLFKAKSGDESITCGPIHV 182

Query: 181 FEDVQXXXXXXXXXXXXFLGNTTLVDCSLESSNLSVLEGSV 303
           FE+++            FLGN+T V+   ESSN SVLEGSV
Sbjct: 183 FENIKDDTSSLDWRNWTFLGNSTYVNGCSESSNSSVLEGSV 223


>emb|CBI19030.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   RLKAKLSAEENSRMFAGRQIHPFFSLWKVGKKSQETADSESSLSAAKSEGGRIICGPIHV 180
           RL+AK++AEENSRMFAGRQ+HPFFS WKVGK+  ET D E+     + +   I  GPIHV
Sbjct: 191 RLEAKMTAEENSRMFAGRQLHPFFSSWKVGKRCNETTDPENMGCLIEKKNKSITFGPIHV 250

Query: 181 FEDVQXXXXXXXXXXXXFLGNTTL-VDCSLESSNLSVLEGS 300
           FE +Q            F   + +   C+ ES++ SV EGS
Sbjct: 251 FERIQDDDVSVDWKNWIFCERSIVKASCAPESASSSVFEGS 291


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