BLASTX nr result

ID: Glycyrrhiza23_contig00027983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027983
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   152   5e-35
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
gb|ABK92768.1| unknown [Populus trichocarpa]                          148   1e-33
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   143   3e-32

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  152 bits (385), Expect = 5e-35
 Identities = 72/146 (49%), Positives = 94/146 (64%)
 Frame = +2

Query: 245 NSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMWC 424
           + D   +VLSR+P K LLGLKC+ + W RIIS  SFI+  LQ     L GF  Q+++ WC
Sbjct: 3   SDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPE-PLAGFFFQERYQWC 61

Query: 425 KEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYLC 604
            EDI T+ YIP          V  T+F FLPE+VV+L SC G+VCCRS  PSP P+I++C
Sbjct: 62  DEDISTISYIPATMEG---TQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPSIFVC 118

Query: 605 NPSNREWITLEWPSYDRRESIALAFD 682
           NPSN++WI L   + D+  S  LAF+
Sbjct: 119 NPSNKQWIRLLETTPDKESSYGLAFN 144


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/148 (48%), Positives = 95/148 (64%)
 Frame = +2

Query: 239 CLNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFM 418
           CL++D  F+VLSR+  K LLGLKC+S+ W  +IS  SFI+AQ Q K   L+GF  Q +  
Sbjct: 6   CLDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHR 64

Query: 419 WCKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIY 598
           +C +DIKT+ Y P+E        +   VF FLP++VVVL+ C G+VCCRSC P   P IY
Sbjct: 65  YCPDDIKTITYFPVERNR-----LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIY 119

Query: 599 LCNPSNREWITLEWPSYDRRESIALAFD 682
           +CNP N EW  L+W    +   IALAF+
Sbjct: 120 VCNPLNSEWWKLDWKEPGKESFIALAFN 147


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/148 (48%), Positives = 95/148 (64%)
 Frame = +2

Query: 239 CLNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFM 418
           CL++D  F+VLSR+  K LLGLKC+S+ W  +IS  SFI+AQ Q K   L+GF  Q +  
Sbjct: 6   CLDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHR 64

Query: 419 WCKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIY 598
           +C +DIKT+ Y P+E        +   VF FLP++VVVL+ C G+VCCRSC P   P IY
Sbjct: 65  YCPDDIKTITYFPVERNR-----LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIY 119

Query: 599 LCNPSNREWITLEWPSYDRRESIALAFD 682
           +CNP N EW  L+W    +   IALAF+
Sbjct: 120 VCNPLNSEWWKLDWKEPGKESFIALAFN 147


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  147 bits (371), Expect = 2e-33
 Identities = 68/147 (46%), Positives = 98/147 (66%)
 Frame = +2

Query: 242 LNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMW 421
           LN+D  F+VLSR P K L+ LK +S+ W  +I + SFI+ Q + +   L+GF  Q +F W
Sbjct: 8   LNTDISFDVLSRFPAKDLVELKRVSKGWQHLIMNQSFIQIQSRRRE-PLSGFFFQQRFQW 66

Query: 422 CKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYL 601
            + DI+T+ YIP++        +H  VF FLP++VV+L++C G+VCCRSC P   P I++
Sbjct: 67  SEYDIETINYIPVK---WEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCFPFELPAIFV 123

Query: 602 CNPSNREWITLEWPSYDRRESIALAFD 682
           CNP N+EW+ L+W   D+  SIALAFD
Sbjct: 124 CNPLNKEWVKLDWTEPDKEHSIALAFD 150


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  143 bits (361), Expect = 3e-32
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
 Frame = +2

Query: 251 DTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMWCKE 430
           D +F+VLSR+P K LL ++ +S+ WHR+I   SF++AQ Q  GLAL+GF+ Q+K+  C  
Sbjct: 6   DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCPI 65

Query: 431 DIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCL-----PSPQPTI 595
           DI T  Y+P++      + V   VFGFLPE+VV+L SC G+VCCRSC       +   TI
Sbjct: 66  DISTFTYMPIDA----DSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTI 121

Query: 596 YLCNPSNREWITLEWPSYDRRESIALAFD 682
           Y+CNP  ++W++ E    D   SIALAFD
Sbjct: 122 YVCNPLFKKWVSFEVAQLDSFSSIALAFD 150


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