BLASTX nr result

ID: Glycyrrhiza23_contig00027973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027973
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539330.1| PREDICTED: zinc finger CCCH domain-containin...   126   2e-27
ref|XP_003551272.1| PREDICTED: zinc finger CCCH domain-containin...   120   2e-25
ref|XP_003590850.1| Zinc finger CCCH domain-containing protein [...   102   4e-20
ref|XP_003519252.1| PREDICTED: zinc finger CCCH domain-containin...   100   1e-19
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    86   3e-15

>ref|XP_003539330.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 605

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/71 (85%), Positives = 63/71 (88%)
 Frame = -1

Query: 214 MCSGPKRKPSQACLIMGDGYGRQEALHHKISALLEFSATDDVMAFKDAVEKGGHDVDEVG 35
           MCSG KRKPSQ  LIMGD +GRQE LHHKISALLEFSA DDV +FKDAVEK GHDVDEVG
Sbjct: 1   MCSGSKRKPSQTGLIMGDEHGRQEGLHHKISALLEFSAADDVTSFKDAVEKEGHDVDEVG 60

Query: 34  LWYGRRVGSKE 2
           LWYGRRVGSKE
Sbjct: 61  LWYGRRVGSKE 71


>ref|XP_003551272.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 608

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/70 (82%), Positives = 60/70 (85%)
 Frame = -1

Query: 214 MCSGPKRKPSQACLIMGDGYGRQEALHHKISALLEFSATDDVMAFKDAVEKGGHDVDEVG 35
           MCSG KRKPSQ  LIMGD YGRQE LHH+ISALLEFSA DDV AF+DAVEK G D DEVG
Sbjct: 1   MCSGSKRKPSQTGLIMGDEYGRQEGLHHEISALLEFSAADDVRAFRDAVEKEGRDFDEVG 60

Query: 34  LWYGRRVGSK 5
           LWYGRRVGSK
Sbjct: 61  LWYGRRVGSK 70


>ref|XP_003590850.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355479898|gb|AES61101.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 774

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/71 (71%), Positives = 55/71 (77%)
 Frame = -1

Query: 214 MCSGPKRKPSQACLIMGDGYGRQEALHHKISALLEFSATDDVMAFKDAVEKGGHDVDEVG 35
           MC+G  RKP Q  LI  +   RQE  HHKISALLEFSA DDVMAF DAVEK  H+VDEVG
Sbjct: 1   MCNGSNRKPCQTGLIRENECERQEEHHHKISALLEFSAKDDVMAFTDAVEKDDHNVDEVG 60

Query: 34  LWYGRRVGSKE 2
           LWYGR+VGSKE
Sbjct: 61  LWYGRKVGSKE 71


>ref|XP_003519252.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform 1 [Glycine max] gi|356500870|ref|XP_003519253.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           66-like isoform 2 [Glycine max]
          Length = 695

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -1

Query: 214 MCSGPKRKPSQACLIMGDGYGRQEALHHKISALLEFSATDDVMAFKDAVEKGGHDVDEVG 35
           MC   K KPSQ  LIM + Y + E +HHKISALLEFSATDD++ FKDAVEK GHDVD VG
Sbjct: 1   MCGVSKGKPSQIDLIMEEKYAK-EGMHHKISALLEFSATDDLIGFKDAVEKEGHDVDGVG 59

Query: 34  LWYGRRVGSKE 2
            WYGRRVGSK+
Sbjct: 60  FWYGRRVGSKK 70


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/72 (61%), Positives = 54/72 (75%)
 Frame = -1

Query: 217 AMCSGPKRKPSQACLIMGDGYGRQEALHHKISALLEFSATDDVMAFKDAVEKGGHDVDEV 38
           +MC   K KPSQ  L+M + Y + E +HH ISALLEFSA DD+++FKDAVEK GHD+D V
Sbjct: 399 SMCGVSKGKPSQFGLVMEE-YAK-EGMHHIISALLEFSAADDLVSFKDAVEKEGHDIDGV 456

Query: 37  GLWYGRRVGSKE 2
           G WYGR V SK+
Sbjct: 457 GFWYGRCVASKK 468


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