BLASTX nr result

ID: Glycyrrhiza23_contig00027966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027966
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing sub...   162   1e-37
ref|XP_003594147.1| hypothetical protein MTR_2g024950 [Medicago ...   119   6e-25
ref|XP_003522264.1| PREDICTED: uncharacterized protein LOC100806...   119   1e-24
ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...   105   1e-20

>ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Glycine
           max]
          Length = 573

 Score =  162 bits (409), Expect = 1e-37
 Identities = 97/156 (62%), Positives = 105/156 (67%)
 Frame = +1

Query: 313 MEHLARSARAWRLRFRSLPSIQTLTSHSSRSIPRSLYPKXXXXXXXXXXXXXXXXXXGTL 492
           ME LARSAR WR  +RS  S QTL S SS   P S +PK                    L
Sbjct: 1   MERLARSARTWRWHWRSFSSFQTLASRSS---PPSSFPKFASSWSTSSSVSSSR----VL 53

Query: 493 RGDSGPYSLLPVVLAGIFGIGLAEKAHADQANNEEVQEIAKKERQRIEELIRSRGIRHGS 672
           R D   YSLLPVVLAGIFG G  E A+AD     +VQE AKKER+RIEEL+RSRGIR+GS
Sbjct: 54  RED---YSLLPVVLAGIFGTGFVEAAYADNGA-VDVQESAKKERERIEELLRSRGIRYGS 109

Query: 673 YPRFTVAVKGQKVSIKFQIPPGCEVSQLIANLTVRL 780
           YPRFTV+VKGQKVSIKFQIPP CEVSQLIANLT  L
Sbjct: 110 YPRFTVSVKGQKVSIKFQIPPNCEVSQLIANLTAHL 145


>ref|XP_003594147.1| hypothetical protein MTR_2g024950 [Medicago truncatula]
           gi|355483195|gb|AES64398.1| hypothetical protein
           MTR_2g024950 [Medicago truncatula]
          Length = 138

 Score =  119 bits (299), Expect = 6e-25
 Identities = 74/135 (54%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +1

Query: 313 MEHLARSARAWRLRFRSLPSIQTLTSHSSRSIPRSLYPKXXXXXXXXXXXXXXXXXXGTL 492
           MEHL RS R+ R RFRSLPS     SHSSR +  S+ P+                    L
Sbjct: 1   MEHLLRSLRSSRFRFRSLPS-----SHSSRRLHSSISPRVEAASARSSSSSVSDVSR-VL 54

Query: 493 RGDSGPYSLLPVVLAGIFGIGLAEKAHAD-QAN-NEEVQEIAKKERQRIEELIRSRGIRH 666
           RGD G YS+LP VLAG+FGI L E A+A+ QAN NE+VQEIA KERQRI++L+ ++GIR 
Sbjct: 55  RGDLGQYSMLPAVLAGLFGIELVETAYAEEQANSNEDVQEIAIKERQRIQDLLTTKGIRP 114

Query: 667 GSYPRFTVAVKGQKV 711
            S PRF VAVKGQKV
Sbjct: 115 SSVPRFNVAVKGQKV 129


>ref|XP_003522264.1| PREDICTED: uncharacterized protein LOC100806110 [Glycine max]
          Length = 169

 Score =  119 bits (297), Expect = 1e-24
 Identities = 61/83 (73%), Positives = 68/83 (81%)
 Frame = +1

Query: 532 LAGIFGIGLAEKAHADQANNEEVQEIAKKERQRIEELIRSRGIRHGSYPRFTVAVKGQKV 711
           + GIFG+G  E A+ D     +VQE AKKER+RIEEL+RSRGIR+GSYPRFTV VKGQKV
Sbjct: 26  ITGIFGMGFLEAAYVDNGA-VDVQESAKKERERIEELLRSRGIRYGSYPRFTVYVKGQKV 84

Query: 712 SIKFQIPPGCEVSQLIANLTVRL 780
           SIKFQIPP CEVSQLIANLT  L
Sbjct: 85  SIKFQIPPNCEVSQLIANLTAHL 107


>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  114 bits (284), Expect = 3e-23
 Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 15/106 (14%)
 Frame = +1

Query: 508 PYSLLPVVLAGIFGIGLAEKAHADQANNE---------------EVQEIAKKERQRIEEL 642
           P SL P +LA   G+G+ + AHAD   N                +++EIAKKERQRIEEL
Sbjct: 31  PNSLFPALLASFIGVGMLQVAHADSDENASKPPLPSESSPSSYGDLEEIAKKERQRIEEL 90

Query: 643 IRSRGIRHGSYPRFTVAVKGQKVSIKFQIPPGCEVSQLIANLTVRL 780
           ++S+GI++GS+PRFT+AVKGQKV+IKFQIPP C+  QLIANL   L
Sbjct: 91  LKSKGIKYGSFPRFTIAVKGQKVTIKFQIPPACDTPQLIANLVSNL 136


>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223542263|gb|EEF43805.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 587

 Score =  105 bits (261), Expect = 1e-20
 Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 15/107 (14%)
 Frame = +1

Query: 505 GPY-SLLPVVLAGIFGIGLAEKAHADQ--------------ANNEEVQEIAKKERQRIEE 639
           GPY S+LP V AG  G+G+ + A+AD               ++ ++++EIA KERQRIE 
Sbjct: 53  GPYYSILPAVFAGFLGLGMFQVAYADSDQAAAKPSLPSESPSSYKDLEEIATKERQRIEG 112

Query: 640 LIRSRGIRHGSYPRFTVAVKGQKVSIKFQIPPGCEVSQLIANLTVRL 780
           L++ RGI++GSYPRF VAVKGQKV+IKFQIPP C+   LIANL   L
Sbjct: 113 LLKLRGIKNGSYPRFMVAVKGQKVTIKFQIPPACDALHLIANLVSNL 159


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