BLASTX nr result

ID: Glycyrrhiza23_contig00027965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027965
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530480.1| PREDICTED: protein MEI2-like 4-like [Glycine...   258   5e-67
gb|ABD32706.1| RNA-binding region RNP-1 (RNA recognition motif);...   172   3e-41
ref|XP_003626605.1| Polyadenylate-binding protein [Medicago trun...   172   3e-41
ref|XP_003621628.1| Terminal ear1-like protein [Medicago truncat...   161   4e-38
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   145   3e-33

>ref|XP_003530480.1| PREDICTED: protein MEI2-like 4-like [Glycine max]
          Length = 719

 Score =  258 bits (658), Expect = 5e-67
 Identities = 121/159 (76%), Positives = 134/159 (84%)
 Frame = +3

Query: 21  LHGVIKSANMDGVRILDGDPSMCTPSIETAFIHGVSSSVPNTLPSLARAKSDGNQCEIIE 200
           LHG+ KS  +DG R+L  +P++CTPS ETAF HGVSSSVPN+LPSL R KS  N+CE+ E
Sbjct: 228 LHGISKSGKLDGGRVLGVEPAICTPSPETAFFHGVSSSVPNSLPSLVRVKSADNRCEVTE 287

Query: 201 SSSPGHLNFDSQAALAFHPHSLPEFHDGLANGVNHNPLEVAANINLRTQERIDNMQFRRV 380
           S SPG LNFDSQAA AFHPHSLPEFHDGLAN V+H P EVAANINL+TQERIDNMQF +V
Sbjct: 288 SGSPGQLNFDSQAAPAFHPHSLPEFHDGLANSVHHIPPEVAANINLKTQERIDNMQFCQV 347

Query: 381 NSDRRFMEFNECVLKSSGNGCCPLPCHHYKWSNSYQPPG 497
           NS+ RFMEFNECV KSSGNG CPLP HHYKW NSYQPPG
Sbjct: 348 NSNGRFMEFNECVFKSSGNGSCPLPGHHYKWGNSYQPPG 386


>gb|ABD32706.1| RNA-binding region RNP-1 (RNA recognition motif); RNA recognition
           motif 2 [Medicago truncatula]
          Length = 722

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/148 (58%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
 Frame = +3

Query: 57  VRILDGDPSMCTPSIETAFIHGVSSSVPNTLPSLARAKSDGNQCEIIESSSPGHLNFDSQ 236
           ++++    S   P      +HG+SSSVPNTLPSL + KS G QCEI ESS  G LN D Q
Sbjct: 304 IQLIHQKSSPIKPPTSFQGLHGISSSVPNTLPSLIKLKSVGIQCEITESSCSGQLNIDRQ 363

Query: 237 AALAFHPHSLPEFHDGLANGVNHNPLEVAANINLRTQERIDNMQFRRVNSDRRFMEFNEC 416
           A LAF+PHSLPE      N + HNPLEVAA+INL+TQ+RID MQF +VNS+  FM+F+EC
Sbjct: 364 ATLAFNPHSLPECRHSFTNAIPHNPLEVAADINLKTQDRIDKMQFCQVNSNGPFMDFDEC 423

Query: 417 VLKSSGNGCC--PLPCHHYKWSNSYQPP 494
           V KSS NG    PLP HH KWSNSY PP
Sbjct: 424 VSKSSSNGSSSFPLPGHHGKWSNSYPPP 451


>ref|XP_003626605.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355501620|gb|AES82823.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 751

 Score =  172 bits (435), Expect = 3e-41
 Identities = 87/148 (58%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
 Frame = +3

Query: 57  VRILDGDPSMCTPSIETAFIHGVSSSVPNTLPSLARAKSDGNQCEIIESSSPGHLNFDSQ 236
           ++++    S   P      +HG+SSSVPNTLPSL + KS G QCEI ESS  G LN D Q
Sbjct: 296 IQLIHQKSSPIKPPTSFQGLHGISSSVPNTLPSLIKLKSVGIQCEITESSCSGQLNIDRQ 355

Query: 237 AALAFHPHSLPEFHDGLANGVNHNPLEVAANINLRTQERIDNMQFRRVNSDRRFMEFNEC 416
           A LAF+PHSLPE      N + HNPLEVAA+INL+TQ+RID MQF +VNS+  FM+F+EC
Sbjct: 356 ATLAFNPHSLPECRHSFTNAIPHNPLEVAADINLKTQDRIDKMQFCQVNSNGPFMDFDEC 415

Query: 417 VLKSSGNGCC--PLPCHHYKWSNSYQPP 494
           V KSS NG    PLP HH KWSNSY PP
Sbjct: 416 VSKSSSNGSSSFPLPGHHGKWSNSYPPP 443


>ref|XP_003621628.1| Terminal ear1-like protein [Medicago truncatula]
           gi|355496643|gb|AES77846.1| Terminal ear1-like protein
           [Medicago truncatula]
          Length = 804

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/136 (59%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
 Frame = +3

Query: 93  PSIETAFIHGVSSSVPNTLPSLARAKSDGNQCEIIESSSPGHLNFDSQAALAFHPHSLPE 272
           P+     +HG SSSVPN LPS+ + KS  NQCE  ESSS G LNFD+QAAL  HPHSLPE
Sbjct: 383 PTTSFQDLHGTSSSVPNMLPSIMKVKSVANQCEFAESSSRGQLNFDTQAALTSHPHSLPE 442

Query: 273 FHDGLANGVNHNPLEVAANINLRTQERIDNMQFRRVNSDRRFMEFNECVLKSSGN--GCC 446
              G  +GV+ NP E AANINL+T ERIDNMQF +VNS+  F++F++CV  SS N     
Sbjct: 443 QRRGFTSGVHQNPHEEAANINLQTPERIDNMQFCQVNSNGPFIDFDKCVSNSSANISSSF 502

Query: 447 PLPCHHYKWSNSYQPP 494
           PLP HH +WSNSY PP
Sbjct: 503 PLPVHHEQWSNSYPPP 518


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  145 bits (366), Expect = 3e-33
 Identities = 85/169 (50%), Positives = 105/169 (62%), Gaps = 7/169 (4%)
 Frame = +3

Query: 6   TSFPGLH--GVIKSANMDGVRIL---DGDPSMCTPSIETAFIHGVSSSVPNTLPSLARAK 170
           T FPG    G I S++M+   I+    G P    P +E    HG+SSSVPNTLPSL   +
Sbjct: 442 TGFPGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVE 501

Query: 171 SDGNQCEIIESS-SPGHLNFDSQAALAFHPHSLPEFHDGLANGVNHNPL-EVAANINLRT 344
           S G+Q  + ESS S G L FD +   + HPHSLPE++DGLANG   NP+  +AANIN R 
Sbjct: 502 SVGSQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMAANINPRP 561

Query: 345 QERIDNMQFRRVNSDRRFMEFNECVLKSSGNGCCPLPCHHYKWSNSYQP 491
            ERI+N Q    NS+   +E N+ V  SSGNG CPLP HHY WSNS+ P
Sbjct: 562 -ERIENRQLSGANSNGLTVELNDGVFGSSGNGSCPLPGHHYMWSNSHHP 609


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