BLASTX nr result
ID: Glycyrrhiza23_contig00027955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00027955
(348 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi... 197 7e-49
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ... 169 2e-40
ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi... 151 6e-35
ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002513633.1| pentatricopeptide repeat-containing protein,... 134 1e-29
>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 197 bits (501), Expect = 7e-49
Identities = 99/118 (83%), Positives = 108/118 (91%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETS 180
+IHASVVKLGLELN VLGT+LVD YTKCDCTVE +KLLAFVKDGDVVSWTTMISSLVETS
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETS 197
Query: 181 KWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGL--GYGKLLHAQLIRLGVEMNLV 348
KWSEALQ+Y+KMIEAG+ PNEFTFVKLLG SFLGL GYGK+LH+QLI GVEMNL+
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
+H+ ++K+GL+ + L +L+ Y KC + L + DVVSWTT++S+
Sbjct: 38 VHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKH 97
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLG-LGYGKLLHAQLIRLGVEMNLV 348
EALQ++ M+ +G CPNEFT L + S LG +G +HA +++LG+E+N V
Sbjct: 98 HFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHV 153
Score = 73.9 bits (180), Expect = 1e-11
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
+H+ ++ G+E+N +L T+++ Y KC + K+ DV WT++IS V+ S+
Sbjct: 241 LHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQ 300
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVE 336
EA+ + M +G+ PN FT+ LL A SS L L G+ H+++I +G+E
Sbjct: 301 VREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLE 352
Score = 69.3 bits (168), Expect = 3e-10
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCD-CTVETYKLLAFVKDGDVVSWTTMISSLVET 177
Q H+ V+ +GLE + +G +LVD Y KC T K + +V+SWT++I+ E
Sbjct: 341 QFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEH 400
Query: 178 SKWSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVEMNL 345
E++Q++ +M AGV PN FT +LGA S + K LH +I+ V++++
Sbjct: 401 GFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDM 457
Score = 55.1 bits (131), Expect = 6e-06
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETS 180
Q+H K G E + SLV Y+KC + Y++ + + D VSW +IS L
Sbjct: 544 QLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNG 603
Query: 181 KWSEALQIYIKMIEAGVCPNEFTFVKLLGASS 276
S+AL + M AGV P+ TF+ L+ A S
Sbjct: 604 LISDALSAFDDMRLAGVKPDSVTFLSLIFACS 635
>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 912
Score = 169 bits (429), Expect = 2e-40
Identities = 88/119 (73%), Positives = 99/119 (83%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDC-TVETYKLLAFVKDG-DVVSWTTMISSLVE 174
QIH S VKLGLE+N +GTSLV+FYTKC C +VE +KLL+ VKDG DVVSWTTM+SSLVE
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195
Query: 175 TSKWSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVEMNLV 348
KW EA +IY+KMIE+GV PNEFTFVKLLGA SSFLGL YGKLLHA LI G E+NLV
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
+HA ++ G ELN VL T++VD Y+KC V+ K+ + DV WTT+IS + +
Sbjct: 240 LHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQ 299
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVEMNL 345
EA+ ++ M +G+ PN FT+ LL A SS L L G+ H+++I +G+E +L
Sbjct: 300 VREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDL 354
Score = 73.9 bits (180), Expect = 1e-11
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
IH+ ++KLGL+ + L +L+ Y K L + + DVVSWTT++SS +T
Sbjct: 36 IHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKH 95
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLG-LGYGKLLHAQLIRLGVEMN 342
S+ALQ++ MI +G PNEFT L + LG G +H ++LG+EMN
Sbjct: 96 HSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMN 149
Score = 65.5 bits (158), Expect = 4e-09
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCD-CTVETYKLLAFVKDGDVVSWTTMISSLVET 177
Q H+ V+ +GLE + +G +LVD Y KC T K+ + +V+ WT++I+ E
Sbjct: 340 QFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE- 398
Query: 178 SKWSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVEMNL 345
+ ++ Q++ +M AGV PN FT +LGA S L +LH +I+ V++++
Sbjct: 399 KRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDI 455
>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product
[Vitis vinifera]
Length = 880
Score = 151 bits (381), Expect = 6e-35
Identities = 68/116 (58%), Positives = 89/116 (76%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETS 180
+ A V K G + NPVLG++L+DFY+KC CT E Y++ ++ +GD+VSWT M+SS VE
Sbjct: 137 RFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAG 196
Query: 181 KWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGLGYGKLLHAQLIRLGVEMNLV 348
WS+ALQ+Y +MI+ GV PNEFTFVKLL ASSFLGL YGKL+HA L+ +E+NLV
Sbjct: 197 SWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLV 252
Score = 80.5 bits (197), Expect = 1e-13
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
+HA ++ +ELN VL T+LVD Y KC + K+ + DV WT +IS ++ K
Sbjct: 238 VHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLK 297
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVE 336
+ EA+ + +M +GV PN FT+ +L A SS L L GK +H++++ G+E
Sbjct: 298 FREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLE 349
Score = 65.9 bits (159), Expect = 3e-09
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVE-TYKLLAFVKDGDVVSWTTMISSLVET 177
QIH+ VV GLE + +G SLVD Y KC +E + + +V+SWT++I+ E
Sbjct: 338 QIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEH 397
Query: 178 SKWSEALQIYIKMIEAGVCPNEFTFVKLLGA-SSFLGLGYGKLLHAQLIRLGVEMNLV 348
E+++++ M GV PN FT +LGA + L + LH +I+ + ++V
Sbjct: 398 GLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVV 455
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
IH+ ++K+G + + L +L+ Y KC E +L + DV SWT ++S+ +
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96
Query: 184 WSEALQIYIKMIEAGVCPNEFTF-VKLLGASSFLGLGYGKLLHAQLIRLGVEMNLV 348
EAL+++ M+ +G PNEFT L S+ +G A + + G + N V
Sbjct: 97 HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPV 152
>ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|222848907|gb|EEE86454.1|
predicted protein [Populus trichocarpa]
Length = 693
Score = 140 bits (353), Expect = 1e-31
Identities = 69/115 (60%), Positives = 88/115 (76%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
IH V+K G E N +LG+ L+D Y+K E +L + V++GDVVSWTTMISSLV+ K
Sbjct: 63 IHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGK 122
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGLGYGKLLHAQLIRLGVEMNLV 348
WS+AL+IYI MI+AGV PNEFTFVK+L A+ FLGL +GK++HA LI GVE+NLV
Sbjct: 123 WSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIVFGVELNLV 177
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
+HA ++ G+ELN V+ T+LV Y+KC + ++ + D WT ++S L + K
Sbjct: 163 VHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLK 222
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGASS-FLGLGYGKLLHAQLIRLGVE 336
EA+ + +M +G+ N FT++ +L A S L L G+ +HA++I G+E
Sbjct: 223 LREAVVAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLE 274
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 133 DVVSWTTMISSLVETSKWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLG-LGYGKLLH 309
DVVSWT ++S+ V+ K EAL ++ +M+ +G CPNEFTF +L A S LG GK +H
Sbjct: 5 DVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKCIH 64
Query: 310 AQLIRLGVEMNLV 348
+I+ G E N +
Sbjct: 65 GCVIKHGFESNQI 77
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVET-YKLLAFVKDGDVVSWTTMISSLVET 177
QIHA V+ GLE + +G +LVD Y KC VE ++ ++ DV+SWT++I+ L E
Sbjct: 263 QIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEH 322
Query: 178 SKWSEALQIYIKMIEAGVCPNEFTFVKLL 264
+ Y++M +G+ PN T +L
Sbjct: 323 GFHQGSFDSYMEMTASGLQPNSVTLSIIL 351
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/96 (34%), Positives = 49/96 (51%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETS 180
Q+H+ VK GL + + LV FY KC T + + A +++ D+VSW +IS L
Sbjct: 466 QLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYG 525
Query: 181 KWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGL 288
S AL + M GV P+ TF+ +L + GL
Sbjct: 526 HISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGL 561
>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 777
Score = 134 bits (336), Expect = 1e-29
Identities = 65/116 (56%), Positives = 88/116 (75%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETS 180
+IHAS +K G E N +LG+SL+D Y++ D T + KL +++ GD VSWTT+I+S V+
Sbjct: 141 RIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAG 200
Query: 181 KWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGLGYGKLLHAQLIRLGVEMNLV 348
K S AL+IY++M+EA V NEFTFV+LL ASSF+GL YGKL+HA I LGV++NLV
Sbjct: 201 KCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVKLNLV 256
Score = 80.5 bits (197), Expect = 1e-13
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
IHA + LG++LN VL T+LV+ Y++C + K+ + DV+ WT +IS L + K
Sbjct: 242 IHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMK 301
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGAS-SFLGLGYGKLLHAQLIRLGVE 336
+ EA+ + KM +GV + FT++ +L S L L G+ +H+++IR G+E
Sbjct: 302 FQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLE 353
Score = 74.7 bits (182), Expect = 7e-12
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 4 IHASVVKLGLELNPVLGTSLVDFYTKCDCTVETYKLLAFVKDGDVVSWTTMISSLVETSK 183
IH+ ++KLGL+ + L +L+ Y+KC + + DVVSWT ++S+ ++ +
Sbjct: 41 IHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNER 100
Query: 184 WSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLG-LGYGKLLHAQLIRLGVEMNLV 348
EAL I+ M+ +G PN FTF +L + LG YGK +HA I+ G E N +
Sbjct: 101 HEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFESNQI 156
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = +1
Query: 1 QIHASVVKLGLELNPVLGTSLVDFYTKCDCTVE-TYKLLAFVKDGDVVSWTTMISSLVET 177
QIH+ V++ GLE + +G +LVD Y KC C VE ++ +K +V+SWT++I+ E
Sbjct: 342 QIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEH 401
Query: 178 SKWSEALQIYIKMIEAGVCPNEFTFVKLLGASSFLGLGYGKL-LHAQLIRLGVEMNLV 348
++L ++++M GV PN FT +L S + Y L LH +I+ + ++V
Sbjct: 402 GFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVV 459