BLASTX nr result

ID: Glycyrrhiza23_contig00027954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027954
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593708.1| Glutamate-gated kainate-type ion channel rec...   105   3e-21
ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]...   103   1e-20
ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   102   2e-20
ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]...   102   2e-20
ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glyc...    97   1e-18

>ref|XP_003593708.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355482756|gb|AES63959.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 635

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -2

Query: 244 FQCLMLGAQAANSSQDTSVAVGVIIDVNSETGKQQRRAMQIAARSFNNYSKTQNISLFFR 65
           FQCL      ANSSQ T+ +VGVIIDVNSE GK Q+ AMQIAA+SFNNYS   NI LFFR
Sbjct: 28  FQCL------ANSSQ-TTTSVGVIIDVNSEIGKNQKTAMQIAAQSFNNYSNNHNIILFFR 80

Query: 64  DSGRNPLQAASAAEELIAKKK 2
           DSG+NPLQAASAAE+LI K+K
Sbjct: 81  DSGKNPLQAASAAEDLITKEK 101


>ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]
           gi|355482754|gb|AES63957.1| Glutamate receptor 2.9
           [Medicago truncatula]
          Length = 947

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = -2

Query: 214 ANSSQDTSVAVGVIIDVNSETGKQQRRAMQIAARSFNNYSKTQNISLFFRDSGRNPLQAA 35
           ANSSQ+T+ +VGVIIDVNSE GKQQR AMQIAA+SFNNYS TQ I+L F DSGRNPLQ+A
Sbjct: 31  ANSSQNTT-SVGVIIDVNSERGKQQRTAMQIAAQSFNNYSNTQTITLLFCDSGRNPLQSA 89

Query: 34  SAAEELIAKKK 2
           S AEELI K+K
Sbjct: 90  STAEELITKEK 100


>ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 914

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -2

Query: 235 LMLGAQAANSSQDTSVAVGVIIDVNSETGKQQRRAMQIAARSFNNYSKTQNISLFFRDSG 56
           L++GAQ A S Q+  ++VGV+IDVNS  GKQQRRAMQIA++SFNNYSK  NI+LFF +SG
Sbjct: 26  LIIGAQVAYSFQN--ISVGVVIDVNSVAGKQQRRAMQIASQSFNNYSKNHNINLFFSNSG 83

Query: 55  RNPLQAASAAEELIAKKK 2
             PLQAASAAEELI KKK
Sbjct: 84  GIPLQAASAAEELIMKKK 101


>ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482753|gb|AES63956.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 939

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/78 (73%), Positives = 61/78 (78%)
 Frame = -2

Query: 235 LMLGAQAANSSQDTSVAVGVIIDVNSETGKQQRRAMQIAARSFNNYSKTQNISLFFRDSG 56
           L+L    AN SQ TSV  GV+IDVNSETGKQQR AMQIAA+SFNNYS   NI L FRDSG
Sbjct: 24  LLLLQCLANRSQTTSV--GVVIDVNSETGKQQRTAMQIAAQSFNNYSHNHNIILLFRDSG 81

Query: 55  RNPLQAASAAEELIAKKK 2
           RNPL AAS AEELI K+K
Sbjct: 82  RNPLHAASTAEELITKEK 99


>ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 926

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/82 (69%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
 Frame = -2

Query: 244 FQCLMLGAQAANSSQDTSVAVGVIIDVNSETGKQQRRAMQIAARSFNNYSKT-QNISLFF 68
           F+CL +GAQ A S Q+TSV  GV+ID NSE GKQQ+RAM IAA++FNN SK   NI LFF
Sbjct: 27  FKCL-IGAQVAYSFQNTSV--GVVIDANSEVGKQQKRAMHIAAQTFNNNSKNHNNIILFF 83

Query: 67  RDSGRNPLQAASAAEELIAKKK 2
            DSG  PLQAASAAEELI KKK
Sbjct: 84  HDSGGIPLQAASAAEELIMKKK 105