BLASTX nr result

ID: Glycyrrhiza23_contig00027904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027904
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33462.1| unknown [Medicago truncatula]                          100   1e-19
ref|XP_003624764.1| Presenilin [Medicago truncatula] gi|35750896...   100   1e-19
ref|XP_003520917.1| PREDICTED: presenilin-like protein At1g08700...    94   2e-17
ref|XP_004144307.1| PREDICTED: presenilin-like protein At1g08700...    93   3e-17
ref|XP_002530952.1| conserved hypothetical protein [Ricinus comm...    91   1e-16

>gb|AFK33462.1| unknown [Medicago truncatula]
          Length = 423

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/74 (68%), Positives = 55/74 (74%)
 Frame = +1

Query: 1   VAAWFTRLPEWTTWTXXXXXXXXXXXXXXXPGGPLKLLVDLASSRDEELPALVYEARPTV 180
           VAAWFT+LPEWTTWT               PGGPLKLLV+LASSR+EELPAL+YEARPTV
Sbjct: 169 VAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTV 228

Query: 181 APTGRSAAALGLFV 222
           AP  R AAA GLFV
Sbjct: 229 APNSR-AAAFGLFV 241


>ref|XP_003624764.1| Presenilin [Medicago truncatula] gi|357508963|ref|XP_003624770.1|
           Presenilin [Medicago truncatula]
           gi|355499779|gb|AES80982.1| Presenilin [Medicago
           truncatula] gi|355499785|gb|AES80988.1| Presenilin
           [Medicago truncatula]
          Length = 600

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/74 (68%), Positives = 55/74 (74%)
 Frame = +1

Query: 1   VAAWFTRLPEWTTWTXXXXXXXXXXXXXXXPGGPLKLLVDLASSRDEELPALVYEARPTV 180
           VAAWFT+LPEWTTWT               PGGPLKLLV+LASSR+EELPAL+YEARPTV
Sbjct: 169 VAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTV 228

Query: 181 APTGRSAAALGLFV 222
           AP  R AAA GLFV
Sbjct: 229 APNSR-AAAFGLFV 241


>ref|XP_003520917.1| PREDICTED: presenilin-like protein At1g08700-like [Glycine max]
          Length = 385

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/74 (66%), Positives = 52/74 (70%)
 Frame = +1

Query: 1   VAAWFTRLPEWTTWTXXXXXXXXXXXXXXXPGGPLKLLVDLASSRDEELPALVYEARPTV 180
           VAAWFT+LPEWTTWT               PGGPLKLLV+LASSRDEELPALVYEARPTV
Sbjct: 169 VAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTV 228

Query: 181 APTGRSAAALGLFV 222
             T   AAA+G  V
Sbjct: 229 -NTRNHAAAVGFIV 241


>ref|XP_004144307.1| PREDICTED: presenilin-like protein At1g08700-like [Cucumis sativus]
           gi|449488277|ref|XP_004157988.1| PREDICTED:
           presenilin-like protein At1g08700-like [Cucumis sativus]
          Length = 456

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/74 (62%), Positives = 51/74 (68%)
 Frame = +1

Query: 1   VAAWFTRLPEWTTWTXXXXXXXXXXXXXXXPGGPLKLLVDLASSRDEELPALVYEARPTV 180
           VAAWFT+LPEWTTW+               PGGPLKLLV+LASSRDEELPALVYEARPTV
Sbjct: 170 VAAWFTKLPEWTTWSLLVALALYDLVAVLAPGGPLKLLVELASSRDEELPALVYEARPTV 229

Query: 181 APTGRSAAALGLFV 222
           +    +   LGL V
Sbjct: 230 SRGPENRGGLGLLV 243


>ref|XP_002530952.1| conserved hypothetical protein [Ricinus communis]
           gi|223529467|gb|EEF31424.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 455

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/66 (65%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   VAAWFTRLPEWTTWTXXXXXXXXXXXXXXXPGGPLKLLVDLASSRDEELPALVYEARPTV 180
           VAAWFT+LPEWTTWT               PGGPLKLLV+LA SRDEELPALVYEARPTV
Sbjct: 174 VAAWFTKLPEWTTWTVLVALAVYDLVAVLAPGGPLKLLVELAQSRDEELPALVYEARPTV 233

Query: 181 APTGRS 198
           +  G +
Sbjct: 234 SQNGNN 239


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