BLASTX nr result

ID: Glycyrrhiza23_contig00027887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027887
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605629.1| TATA-binding protein-associated factor [Medi...   180   1e-43
ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   178   5e-43
ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...   170   1e-40
ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated f...   170   1e-40
ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated f...   140   1e-31

>ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
           gi|355506684|gb|AES87826.1| TATA-binding
           protein-associated factor [Medicago truncatula]
          Length = 1477

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/103 (86%), Positives = 95/103 (92%)
 Frame = -3

Query: 311 CSVEDLETAARSYMTSWIELASTPFGSALDASKMYWPVAFPRKSQFRAAAKMRAVKIENE 132
           CSV DLE AA SYMTSWIELASTPFGSALDASKM+WPVAFPRKSQFRAAAKMRAVKIENE
Sbjct: 219 CSVVDLENAASSYMTSWIELASTPFGSALDASKMFWPVAFPRKSQFRAAAKMRAVKIENE 278

Query: 131 YGGDFGLDSTKATIPPDRNGDVTMSSIKIVVGADVDTSVTRTR 3
           YGGD GL+S K+TIP DRNGDV ++SIKIVVGA+VD SVTRTR
Sbjct: 279 YGGDLGLESMKSTIPQDRNGDVPLNSIKIVVGAEVDISVTRTR 321


>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/103 (85%), Positives = 93/103 (90%)
 Frame = -3

Query: 311  CSVEDLETAARSYMTSWIELASTPFGSALDASKMYWPVAFPRKSQFRAAAKMRAVKIENE 132
            CSVEDLE AARSY+ SWIELASTPFGSALDASKMYWPVAFPRKSQ RAAAKMRA KIENE
Sbjct: 787  CSVEDLEIAARSYVASWIELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENE 846

Query: 131  YGGDFGLDSTKATIPPDRNGDVTMSSIKIVVGADVDTSVTRTR 3
             G DF LDS K TIPPDRNGDV+M+S+KIVVGA+VDTSVT TR
Sbjct: 847  CGVDFSLDSIKGTIPPDRNGDVSMNSVKIVVGAEVDTSVTHTR 889


>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 2
            [Glycine max]
          Length = 2064

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/103 (81%), Positives = 90/103 (87%)
 Frame = -3

Query: 311  CSVEDLETAARSYMTSWIELASTPFGSALDASKMYWPVAFPRKSQFRAAAKMRAVKIENE 132
            CSVEDL+ AARSY+ SW ELASTPFGSALDASKMYWPVAFPRKSQ RAAAKMRA KIENE
Sbjct: 804  CSVEDLKIAARSYVASWTELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENE 863

Query: 131  YGGDFGLDSTKATIPPDRNGDVTMSSIKIVVGADVDTSVTRTR 3
             G DF L+S K  IPPDRNGDV M+S+KIVVGA+VDTSVT TR
Sbjct: 864  SGVDFSLESIKGIIPPDRNGDVPMNSVKIVVGAEVDTSVTHTR 906


>ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 1
            [Glycine max]
          Length = 2047

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/103 (81%), Positives = 90/103 (87%)
 Frame = -3

Query: 311  CSVEDLETAARSYMTSWIELASTPFGSALDASKMYWPVAFPRKSQFRAAAKMRAVKIENE 132
            CSVEDL+ AARSY+ SW ELASTPFGSALDASKMYWPVAFPRKSQ RAAAKMRA KIENE
Sbjct: 787  CSVEDLKIAARSYVASWTELASTPFGSALDASKMYWPVAFPRKSQIRAAAKMRAAKIENE 846

Query: 131  YGGDFGLDSTKATIPPDRNGDVTMSSIKIVVGADVDTSVTRTR 3
             G DF L+S K  IPPDRNGDV M+S+KIVVGA+VDTSVT TR
Sbjct: 847  SGVDFSLESIKGIIPPDRNGDVPMNSVKIVVGAEVDTSVTHTR 889


>ref|XP_003633864.1| PREDICTED: TATA-binding protein-associated factor 172 isoform 3
            [Vitis vinifera]
          Length = 2060

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/103 (66%), Positives = 85/103 (82%)
 Frame = -3

Query: 311  CSVEDLETAARSYMTSWIELASTPFGSALDASKMYWPVAFPRKSQFRAAAKMRAVKIENE 132
            CSV DLE AARSY++SWIELA+TP+GS LD++KM+WPVA PRKS FRAAAKMRAVK+EN+
Sbjct: 801  CSVGDLEDAARSYISSWIELATTPYGSPLDSTKMFWPVALPRKSHFRAAAKMRAVKLEND 860

Query: 131  YGGDFGLDSTKATIPPDRNGDVTMSSIKIVVGADVDTSVTRTR 3
               + GLD TK T   +RNGD + +S+KI+VGAD++ SVT TR
Sbjct: 861  SCRNIGLDFTKETNLQERNGDSSANSVKIIVGADLEKSVTHTR 903


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