BLASTX nr result

ID: Glycyrrhiza23_contig00027867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027867
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA...   191   6e-47
ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|3555192...   186   2e-45
ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793...   181   4e-44
ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780...   179   2e-43
emb|CBI28417.3| unnamed protein product [Vitis vinifera]              135   3e-30

>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1|
           nucleoporin [Lotus japonicus]
          Length = 1309

 Score =  191 bits (485), Expect = 6e-47
 Identities = 100/127 (78%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +2

Query: 146 MFSCGTKKKSNA-REQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSVL 322
           MFSCGTKK + A R+Q R  + L DSPVT PLRSS    AVPNRPPTGTPAPWTPRLSVL
Sbjct: 1   MFSCGTKKNNGASRDQARASSVL-DSPVTPPLRSS----AVPNRPPTGTPAPWTPRLSVL 55

Query: 323 ARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSLA 502
           ARVPQVNR+GKEDNTDPIKPVFV+EFPQVVRDEQA  LH RVPVE C ASGGIDKSTSLA
Sbjct: 56  ARVPQVNRTGKEDNTDPIKPVFVAEFPQVVRDEQAALLHKRVPVEGC-ASGGIDKSTSLA 114

Query: 503 WIVCGSK 523
           WI+ G++
Sbjct: 115 WIISGNR 121


>ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|355519281|gb|AET00905.1|
           Nucleoporin [Medicago truncatula]
          Length = 1308

 Score =  186 bits (472), Expect = 2e-45
 Identities = 97/128 (75%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
 Frame = +2

Query: 146 MFSCGTKKKSNAREQGRGHTTLFDSPVT-TPLR-SSFNDNAVPNRPPTGTPAPWTPRLSV 319
           MFS G KKK N     R   TL DSPVT +PLR +SFND A+PNRPPTGTPAPWTPRLSV
Sbjct: 1   MFSTGPKKKKN---NPRTPPTLSDSPVTPSPLRRTSFNDTAIPNRPPTGTPAPWTPRLSV 57

Query: 320 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 499
           LARVPQVNR+GKED+ DPIKPVFVSEFP+VV DEQATSL  RV  EDC   GGIDKSTSL
Sbjct: 58  LARVPQVNRNGKEDDNDPIKPVFVSEFPKVVCDEQATSLQRRVSFEDCGGYGGIDKSTSL 117

Query: 500 AWIVCGSK 523
           AWI+CGSK
Sbjct: 118 AWIICGSK 125


>ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793167 [Glycine max]
          Length = 1312

 Score =  181 bits (460), Expect = 4e-44
 Identities = 92/128 (71%), Positives = 105/128 (82%), Gaps = 2/128 (1%)
 Frame = +2

Query: 146 MFSCGTKKKS--NAREQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSV 319
           MFSCGTKK +  + REQGR  +T+ DSPVT P R+SF+DNAVPNRP TGTP PW PRLSV
Sbjct: 1   MFSCGTKKSNVRSRREQGRD-STVVDSPVT-PARTSFHDNAVPNRPTTGTPVPWAPRLSV 58

Query: 320 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 499
           LARVPQVNR+GK D+TDP KPVFV EFPQVVRDEQ+  LH R+P ED    GGIDKSTSL
Sbjct: 59  LARVPQVNRTGKGDDTDPTKPVFVGEFPQVVRDEQSILLHNRIPAED-RVCGGIDKSTSL 117

Query: 500 AWIVCGSK 523
           AWI+CG++
Sbjct: 118 AWIICGNR 125


>ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780148 [Glycine max]
          Length = 1315

 Score =  179 bits (454), Expect = 2e-43
 Identities = 93/128 (72%), Positives = 104/128 (81%), Gaps = 2/128 (1%)
 Frame = +2

Query: 146 MFSCGTKKKS--NAREQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSV 319
           MFSCGTKK +  + R QGR  +T+ DSPVT P R+SF+DN VPNRP TGTPAPW PRLSV
Sbjct: 1   MFSCGTKKSNVRSRRLQGRD-STVVDSPVT-PARTSFHDNGVPNRPTTGTPAPWAPRLSV 58

Query: 320 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 499
           LARVPQVNRSGK D+TDP KPVFV EFPQVVRDEQ   LH R+P ED  A GGIDKSTSL
Sbjct: 59  LARVPQVNRSGKGDDTDPTKPVFVGEFPQVVRDEQNILLHKRIPAED-HACGGIDKSTSL 117

Query: 500 AWIVCGSK 523
           AWI+CG++
Sbjct: 118 AWIICGNR 125


>emb|CBI28417.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
 Frame = +2

Query: 146 MFSCGTKKKSNAREQGRGHTTLFDSPVTTPL---RSSFNDNAVPNRPPTGTPAPWTPRLS 316
           MFS  TK+ + +  + R       +   TPL   R S N+N++PNRP TGTPAPWT RLS
Sbjct: 1   MFSPATKRPNFSSRKDRNLGQAVPNSPITPLTENRRSLNENSIPNRPSTGTPAPWTSRLS 60

Query: 317 VLARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTS 496
           V AR+PQ+ +S K D  DP++PV+V EFPQVVRDEQA+ L  RVP  D +  GG+DK T+
Sbjct: 61  VYARIPQLKKSEKGDEIDPVQPVYVGEFPQVVRDEQASFLQKRVP-GDASIFGGMDKGTA 119

Query: 497 LAWIVCGSK 523
           L+WI+CG+K
Sbjct: 120 LSWIICGNK 128


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