BLASTX nr result

ID: Glycyrrhiza23_contig00027864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027864
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520225.1| PREDICTED: protease Do-like 2, chloroplastic...    62   5e-08
ref|XP_003536894.1| PREDICTED: protease Do-like 2, chloroplastic...    59   3e-07

>ref|XP_003520225.1| PREDICTED: protease Do-like 2, chloroplastic-like [Glycine max]
          Length = 612

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 46/98 (46%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = +2

Query: 110 MVVALPSYXXXXXXXXXXXKFRYSQRHTHSHRPII-SIRCSRTP---SNPDPLSSSPKLN 277
           M VAL S            KFRYS RH    RPI+ S  C+  P   S+    SSS K N
Sbjct: 1   MAVALSSCTSLSSVLFSTVKFRYSLRH----RPIVASFHCNNHPLRVSSSSSSSSSSKSN 56

Query: 278 RQKEGVVQKQQLEQSKDERATTRGNVVGPKPTSYKPFG 391
           R+KEG   K+Q   SKDER   RGNV+  +PTS KPFG
Sbjct: 57  RKKEGAGHKKQ---SKDERPA-RGNVLESQPTSSKPFG 90


>ref|XP_003536894.1| PREDICTED: protease Do-like 2, chloroplastic-like [Glycine max]
          Length = 612

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 54/124 (43%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
 Frame = +2

Query: 110 MVVALPSYXXXXXXXXXXXKFRYSQRHTHSHRPIISIRCSRTPSNPDPL------SSSPK 271
           M VAL S            KFRYS RH    RPI++   S   +N  PL      SSS K
Sbjct: 1   MAVALTSCISSSSVLFSTVKFRYSLRH----RPIVA---SFYNNNNYPLRLSSSSSSSSK 53

Query: 272 LNRQKEGVVQKQQLEQSKDERATTRGNVVGPKPT-SYKPFGTPXXXXXXXXXXXXXXXEP 448
            NRQKEGV QK   +QSKDER   RGNV+ P+ T S KPFG                 EP
Sbjct: 54  SNRQKEGVGQK---KQSKDER-PARGNVLEPQQTSSSKPFGIQRKNKDLIFDSKDQQVEP 109

Query: 449 SNLQ 460
           S LQ
Sbjct: 110 SALQ 113


Top