BLASTX nr result

ID: Glycyrrhiza23_contig00027852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027852
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vit...    67   1e-09
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002510880.1| DNA binding protein, putative [Ricinus commu...    66   3e-09
ref|XP_002510878.1| DNA binding protein, putative [Ricinus commu...    63   2e-08

>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/85 (42%), Positives = 53/85 (62%)
 Frame = +3

Query: 27  PPTNVLVHQYLGGLEVVLSRSIEDQRFPALSRILDMLLQEKITVVNCVYCKVEQRLIYTI 206
           P + V +  Y GG+EVV       Q  P LSR+L +LL+E I+VVNCV  KV +RL +T+
Sbjct: 157 PISPVTLQPYPGGIEVVFDSDFRGQDSP-LSRVLQVLLEEGISVVNCVSTKVNERLFHTV 215

Query: 207 QLQISDATCFEPSALQRKLSEAISS 281
           Q +++D  C   S L++KL+  + S
Sbjct: 216 QTEVNDPACLNLSELRQKLTLRVVS 240


>ref|XP_002271172.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084087|emb|CBI24475.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/86 (37%), Positives = 59/86 (68%)
 Frame = +3

Query: 27  PPTNVLVHQYLGGLEVVLSRSIEDQRFPALSRILDMLLQEKITVVNCVYCKVEQRLIYTI 206
           PP  V+V   LGG+E+++S    ++    LSR++++L +E+++VV+CV  KV + L++TI
Sbjct: 120 PPNCVVVSPCLGGVEILVSGGFREEGL--LSRVMELLFEERLSVVSCVSTKVNEGLLHTI 177

Query: 207 QLQISDATCFEPSALQRKLSEAISSS 284
             +++D +C + S LQ+KL +A + S
Sbjct: 178 NCKVADPSCVDLSMLQQKLLDAANPS 203


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/86 (37%), Positives = 56/86 (65%)
 Frame = +3

Query: 33  TNVLVHQYLGGLEVVLSRSIEDQRFPALSRILDMLLQEKITVVNCVYCKVEQRLIYTIQL 212
           ++V +  Y GG+E+     +  +  P LSR+L +LL+E I+V+NCV  KV +RL +++Q 
Sbjct: 159 SSVALQPYPGGIEITFDSDLMGRDLP-LSRVLQVLLEEGISVINCVSTKVNERLFHSVQT 217

Query: 213 QISDATCFEPSALQRKLSEAISSSCE 290
           +++D TC   S L +KL+  +SS+ +
Sbjct: 218 EVNDPTCLNLSELWQKLTLVVSSTSD 243


>ref|XP_002510880.1| DNA binding protein, putative [Ricinus communis]
           gi|223549995|gb|EEF51482.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 196

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +3

Query: 27  PPTNVLVHQYLGGLEVVLSRSIED--QRFPALSRILDMLLQEKITVVNCVYCKVEQRLIY 200
           P + VL+   LGG+E+  S ++ +  Q F  LSR+L +LL+ +I+VVNCV   V +R+++
Sbjct: 112 PSSGVLIRPCLGGIEISFSSNLREKGQGF-TLSRVLQVLLEAEISVVNCVSTNVNKRVLH 170

Query: 201 TIQLQISDATCFEPSALQRKLSEAI 275
           TIQ ++ D  C   S LQ+KL+  +
Sbjct: 171 TIQTEVKDPACLNLSELQQKLTSLV 195


>ref|XP_002510878.1| DNA binding protein, putative [Ricinus communis]
           gi|223549993|gb|EEF51480.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 243

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/82 (41%), Positives = 54/82 (65%)
 Frame = +3

Query: 39  VLVHQYLGGLEVVLSRSIEDQRFPALSRILDMLLQEKITVVNCVYCKVEQRLIYTIQLQI 218
           V V  YLGG+E+V+S    D+ F  LSR+L+ +++E   VV+C+  K +QR+  TIQ Q 
Sbjct: 158 VSVRSYLGGVEIVISCDSGDENF-LLSRVLEAVIEEGFDVVSCISTKSDQRIYNTIQCQA 216

Query: 219 SDATCFEPSALQRKLSEAISSS 284
           +  T  + +ALQ+KL++ I S+
Sbjct: 217 NHNTYVDLAALQQKLNDVILST 238


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