BLASTX nr result

ID: Glycyrrhiza23_contig00027843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027843
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   341   5e-92
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   338   3e-91
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   290   1e-76
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   284   8e-75
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   283   1e-74

>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  341 bits (874), Expect = 5e-92
 Identities = 166/184 (90%), Positives = 178/184 (96%)
 Frame = -3

Query: 555  IMIKKGQKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 376
            ++IKKGQKVAVCGSVGSGKSS LC +LGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE
Sbjct: 615  LVIKKGQKVAVCGSVGSGKSSLLCCLLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 674

Query: 375  NILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQLARALYN 196
            NILFGKQM+K+FYE+VLDGCALHQDIN W DGDL LVEERGINLSGGQKQRIQLARA+YN
Sbjct: 675  NILFGKQMKKEFYEDVLDGCALHQDINMWGDGDLNLVEERGINLSGGQKQRIQLARAVYN 734

Query: 195  NSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVVMKDGKI 16
            +SDIYFLDDPFSAVDAHTG+HLFKKCLM+LL +KTVVYATHQLEFLEAADLI+VMKDGKI
Sbjct: 735  DSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKI 794

Query: 15   VESG 4
            VESG
Sbjct: 795  VESG 798



 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
 Frame = -3

Query: 537  QKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVT------------KVYGTRSYVPQSPWIQ 394
            +K+ V G  GSGKS+ +  +   +  + G++              +      +PQ P + 
Sbjct: 1232 KKIGVVGRTGSGKSTLVQALFRVVEPLEGSILIDGVDISKIGLQDLRSKLGIIPQDPTLF 1291

Query: 393  SGTVRENILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQL 214
             GTVR N+   +Q +      VL  C L + +          V E G N S GQ+Q + L
Sbjct: 1292 LGTVRTNLDPLEQHEDQELWEVLSKCHLAEIVRRDQRLLDAPVAENGENWSVGQRQLVCL 1351

Query: 213  ARALYNNSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVV 34
            AR L     I  LD+  +++D  T  +L +K + +     TV+   H++  +   D ++V
Sbjct: 1352 ARLLLKKRRILVLDEATASIDTAT-DNLIQKTIREETSGCTVITVAHRIPTVIDNDRVLV 1410

Query: 33   MKDGKIVE 10
            + +G IVE
Sbjct: 1411 LDEGTIVE 1418


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  338 bits (868), Expect = 3e-91
 Identities = 164/184 (89%), Positives = 177/184 (96%)
 Frame = -3

Query: 555  IMIKKGQKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 376
            ++IKKGQKVA+CGSVGSGKSS +C +LGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE
Sbjct: 617  LVIKKGQKVAICGSVGSGKSSLICCLLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 676

Query: 375  NILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQLARALYN 196
            NILFGKQM+KDFYE+VLDGCALHQDIN W DGDL  VEERGINLSGGQKQRIQLARA+YN
Sbjct: 677  NILFGKQMKKDFYEDVLDGCALHQDINMWGDGDLNPVEERGINLSGGQKQRIQLARAVYN 736

Query: 195  NSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVVMKDGKI 16
            +SDIYFLDDPFSAVDAHTG+HLFKKCLM+LL +KTVVYATHQLEFLEAADLI+VMKDGKI
Sbjct: 737  DSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKI 796

Query: 15   VESG 4
            VESG
Sbjct: 797  VESG 800



 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
 Frame = -3

Query: 537  QKVAVCGSVGSGKSSFL------------CTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQ 394
            +K+ V G  GSGKS+ +            C ++  + +    +  +      +PQ P + 
Sbjct: 1234 KKIGVVGRTGSGKSTLVQALFRVVEPLEGCILIDGVDISKIGLQDLRSKLGIIPQDPTLF 1293

Query: 393  SGTVRENILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQL 214
             GTVR N+   +Q        VL  C L + +          V E G N S GQ+Q + L
Sbjct: 1294 LGTVRTNLDPLEQHADQELWEVLSKCHLAEIVRRDPRLLDAPVAENGENWSVGQRQLVCL 1353

Query: 213  ARALYNNSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVV 34
            AR L     I  LD+  +++D  T  +L +K + +     TV+   H++  +   D ++V
Sbjct: 1354 ARLLLKKRRILVLDEATASIDTAT-DNLIQKTIREETNGCTVITVAHRIPTVIDNDRVLV 1412

Query: 33   MKDGKIVE 10
            + +G IVE
Sbjct: 1413 LDEGTIVE 1420


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  290 bits (742), Expect = 1e-76
 Identities = 136/185 (73%), Positives = 164/185 (88%)
 Frame = -3

Query: 555  IMIKKGQKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 376
            + I KG KVAVCGSVGSGKSS LC++LGEIP +SGA  KVYG ++YVPQS WIQ+G V+E
Sbjct: 625  LKIMKGYKVAVCGSVGSGKSSLLCSILGEIPRISGAGIKVYGKKAYVPQSAWIQTGIVKE 684

Query: 375  NILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQLARALYN 196
            N+LFGK M K FYE+V++GCAL+QDI  W+ GDLT++ ERGINLSGGQKQRIQLARA+Y+
Sbjct: 685  NVLFGKDMDKAFYEDVMEGCALNQDIRIWTHGDLTVIGERGINLSGGQKQRIQLARAVYS 744

Query: 195  NSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVVMKDGKI 16
            NSD+Y LDDPFSAVDAHTG+HLFKKCL QLL +KTV+YATHQLEF++AADL++VMKDG I
Sbjct: 745  NSDVYILDDPFSAVDAHTGTHLFKKCLAQLLSQKTVIYATHQLEFVDAADLVLVMKDGII 804

Query: 15   VESGR 1
            V+SG+
Sbjct: 805  VQSGK 809



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
 Frame = -3

Query: 540  GQKVAVCGSVGSGKSSFLCTMLGEIP------LVSGAVTKVYGTRSY------VPQSPWI 397
            G+K+ V G  GSGKS+ +  +   I       L+ G      G R        +PQ P +
Sbjct: 1244 GKKIGVVGRTGSGKSTLIQALFRVIEPSEGQILIDGQDISKIGLRDLRSGLGIIPQDPTL 1303

Query: 396  QSGTVRENILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQ 217
              GTVR N+   ++        VL  C L   +   S      V E G N S GQ+Q + 
Sbjct: 1304 FQGTVRTNLDPLQEHSDHEIWEVLKKCRLADIVRQDSRLLEAPVAEDGENWSVGQRQLVC 1363

Query: 216  LARALYNNSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIV 37
            LAR L     I  LD+  +++D  T  ++ +  + +     TV+   H++  +   DL++
Sbjct: 1364 LARVLLKKRRILVLDEATASIDTAT-DNIIQGAIREETSRCTVITVAHRIPTVIDNDLVL 1422

Query: 36   VMKDGKIVE 10
            V+ +GK++E
Sbjct: 1423 VLDEGKVIE 1431


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  284 bits (726), Expect = 8e-75
 Identities = 130/185 (70%), Positives = 166/185 (89%)
 Frame = -3

Query: 555  IMIKKGQKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRE 376
            ++I KG KVAVCGSVGSGKSS LC++LGEIP +SG  +KVYG+++YVPQS WIQ+GT+R+
Sbjct: 625  MIIMKGYKVAVCGSVGSGKSSLLCSILGEIPRISGTGSKVYGSKAYVPQSAWIQTGTIRD 684

Query: 375  NILFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQLARALYN 196
            N+LFGK++ K FYE+VL+ CAL +DI  W +GDL++V ERG+NLSGGQKQRIQLARA+Y+
Sbjct: 685  NVLFGKEINKAFYEDVLEACALDRDIQLWYNGDLSVVGERGMNLSGGQKQRIQLARAIYS 744

Query: 195  NSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLIVVMKDGKI 16
             SD+YFLDDPFSAVDAHTG+HLF+KCLMQ+L +KTV+Y THQLEFL+A+DL++VMKDG I
Sbjct: 745  ESDVYFLDDPFSAVDAHTGAHLFQKCLMQILSQKTVIYVTHQLEFLDASDLVLVMKDGII 804

Query: 15   VESGR 1
            V+SG+
Sbjct: 805  VQSGK 809



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
 Frame = -3

Query: 537  QKVAVCGSVGSGKSSFLCTML-------GEIPLVSGAVTKVYGTR------SYVPQSPWI 397
            +K+ V G  GSGKS+ +  +        G+I L+ G      G +      S +PQ P +
Sbjct: 1244 RKIGVVGRTGSGKSTLIQALFRVVEPSEGQI-LIDGVDISKMGLKDLRSRLSIIPQDPTL 1302

Query: 396  QSGTVRENI-LFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRI 220
              GT+R N+   G+   ++ +E VL+ C L + I          V E G N S GQ+Q +
Sbjct: 1303 FQGTMRTNLDPLGEHSDQEIWE-VLNKCRLAEIIGQDKGLLNARVAEDGENWSVGQRQLV 1361

Query: 219  QLARALYNNSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLI 40
             LAR L     I  LD+  ++VD  T  +L +K + +   + TV+   H++  +   DL+
Sbjct: 1362 CLARVLLQRRKILVLDEATASVDTAT-DNLIQKTIREETSKCTVITVAHRIPTVIDNDLV 1420

Query: 39   VVMKDGKIVE 10
            +V+ +GK+VE
Sbjct: 1421 LVLDEGKVVE 1430


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  283 bits (725), Expect = 1e-74
 Identities = 139/209 (66%), Positives = 167/209 (79%), Gaps = 26/209 (12%)
 Frame = -3

Query: 549  IKKGQKVAVCGSVGSGKSSFLCTMLGEIPLVSGAVTKVYGTRSYVPQSPWIQSGTVRENI 370
            I KG KVAVCGSVGSGKSS LC++LGEIP++SGA  KV+GT++YVPQS WIQ+GTVR+N+
Sbjct: 505  IMKGYKVAVCGSVGSGKSSLLCSILGEIPMISGAGVKVHGTKAYVPQSAWIQTGTVRDNV 564

Query: 369  LFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRIQLARALYNNS 190
            LFGK M K+ YE+VL+GCAL+QDI  W+DGDLT+V ERG+NLSGGQKQRIQLARA+Y+NS
Sbjct: 565  LFGKDMSKEIYEDVLEGCALNQDIEIWADGDLTVVGERGMNLSGGQKQRIQLARAVYSNS 624

Query: 189  DIYFLDDPFSAVDAHTGSHLFK--------------------------KCLMQLLREKTV 88
            D+Y LDDPFSAVDAHTG+HLFK                          KCLMQLL +KTV
Sbjct: 625  DVYILDDPFSAVDAHTGTHLFKARIFLIFFCFLFISRATLLPCRYSHLKCLMQLLSQKTV 684

Query: 87   VYATHQLEFLEAADLIVVMKDGKIVESGR 1
            +YATHQLEFL+AADL++V KDG IV+SG+
Sbjct: 685  IYATHQLEFLDAADLVLVTKDGVIVQSGK 713



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
 Frame = -3

Query: 540  GQKVAVCGSVGSGKSSFLCTMLGEIP------LVSGAVTKVYGTRSY------VPQSPWI 397
            G+K+ V G  GSGKS+ +  +   I       L+ G      G R        +PQ P +
Sbjct: 1148 GKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLDISKIGLRDLRSKLGIIPQDPTL 1207

Query: 396  QSGTVRENI-LFGKQMQKDFYENVLDGCALHQDINTWSDGDLTLVEERGINLSGGQKQRI 220
              GTVR N+    K   ++ +E VL+ C L   +          V E G N S GQ+Q +
Sbjct: 1208 FRGTVRTNLDPLEKHSDQEIWE-VLNKCRLADIVKRDKRLLDAPVSEDGENWSVGQRQLV 1266

Query: 219  QLARALYNNSDIYFLDDPFSAVDAHTGSHLFKKCLMQLLREKTVVYATHQLEFLEAADLI 40
             LAR L     I  LD+  +++D  T  ++ +  + +     TV+   H++  +   DLI
Sbjct: 1267 CLARVLLKKRRILVLDEATASIDIET-DNIIQGTIREETSRCTVITVAHRIPTVIDNDLI 1325

Query: 39   VVMKDGKIVE 10
            +V++DGK+VE
Sbjct: 1326 LVLEDGKVVE 1335


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