BLASTX nr result

ID: Glycyrrhiza23_contig00027826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027826
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534406.1| PREDICTED: structural maintenance of chromos...   154   9e-36
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   122   2e-26
emb|CBI38567.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   119   3e-25
emb|CAN75899.1| hypothetical protein VITISV_033581 [Vitis vinifera]   119   3e-25

>ref|XP_003534406.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Glycine max]
          Length = 1057

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/83 (90%), Positives = 78/83 (93%)
 Frame = -1

Query: 251  RLNQTLRRESQRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLDACQRALQLRRSKFQ 72
            RLNQT+RRESQRYSESIDDLRMLY KKERKIIKRQQVYK LRQKLDACQRAL+LR+ KFQ
Sbjct: 857  RLNQTIRRESQRYSESIDDLRMLYKKKERKIIKRQQVYKTLRQKLDACQRALELRKRKFQ 916

Query: 71   TNATYLKHQLSWKFNDHLRKKGI 3
             NATYLKHQLSWKFN HLRKKGI
Sbjct: 917  RNATYLKHQLSWKFNGHLRKKGI 939


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
            communis] gi|223550086|gb|EEF51573.1| structural
            maintenance of chromosomes 6 smc6, putative [Ricinus
            communis]
          Length = 1058

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = -1

Query: 251  RLNQTLRRESQRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLDACQRALQLRRSKFQ 72
            RLNQ L+ ESQRYS+SIDDLRMLY KK+RKI+K+QQ+YK  R+KL+AC+RAL LR +KFQ
Sbjct: 858  RLNQRLQHESQRYSDSIDDLRMLYEKKQRKILKKQQMYKGFREKLEACKRALDLRWNKFQ 917

Query: 71   TNATYLKHQLSWKFNDHLRKKGI 3
             N+T LK QL+W FN HL KKGI
Sbjct: 918  RNSTLLKRQLTWNFNGHLGKKGI 940


>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = -1

Query: 251  RLNQTLRRESQRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLDACQRALQLRRSKFQ 72
            RLNQ L+ ESQRY+E I+DLRM+Y KKER+I+++QQ Y+A R+KL+AC+ AL LR SKFQ
Sbjct: 827  RLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALDLRWSKFQ 886

Query: 71   TNATYLKHQLSWKFNDHLRKKGI 3
             NAT LK QL+W+FN HLRKKGI
Sbjct: 887  RNATLLKRQLTWQFNAHLRKKGI 909


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Vitis vinifera]
          Length = 1057

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = -1

Query: 251  RLNQTLRRESQRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLDACQRALQLRRSKFQ 72
            RLNQ L+ ESQRY+E I+DLRM+Y KKER+I+++QQ Y+A R+KL+AC+ AL LR SKFQ
Sbjct: 857  RLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALDLRWSKFQ 916

Query: 71   TNATYLKHQLSWKFNDHLRKKGI 3
             NAT LK QL+W+FN HLRKKGI
Sbjct: 917  RNATLLKRQLTWQFNAHLRKKGI 939


>emb|CAN75899.1| hypothetical protein VITISV_033581 [Vitis vinifera]
          Length = 177

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = -1

Query: 251 RLNQTLRRESQRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLDACQRALQLRRSKFQ 72
           RLNQ L+ ESQRY+E I+DLRM+Y KKER+I+++QQ Y+A R+KL+AC+ AL LR SKFQ
Sbjct: 50  RLNQRLQSESQRYAEPIEDLRMIYDKKERRILRKQQTYEAFREKLNACKEALDLRWSKFQ 109

Query: 71  TNATYLKHQLSWKFNDHLRKKGI 3
            NAT LK QL+W+FN HLRKKGI
Sbjct: 110 RNATLLKRQLTWQFNAHLRKKGI 132


Top