BLASTX nr result

ID: Glycyrrhiza23_contig00027821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027821
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94...   363   9e-99
ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicag...   360   1e-97
ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicag...   354   7e-96
ref|XP_003625399.1| Pleiotropic drug resistance protein [Medicag...   354   7e-96
ref|XP_003553514.1| PREDICTED: pleiotropic drug resistance prote...   353   1e-95

>ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94732079|emb|CAK03587.1|
            PDR-like ABC-transporter [Glycine max]
          Length = 1447

 Score =  363 bits (933), Expect = 9e-99
 Identities = 177/193 (91%), Positives = 186/193 (96%)
 Frame = -1

Query: 581  VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 402
            VGLPG++GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR+TVDTGRT
Sbjct: 991  VGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRDTVDTGRT 1050

Query: 401  VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYNP 222
            VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLI+YFEGI GV+KI DGYNP
Sbjct: 1051 VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLINYFEGIQGVNKIKDGYNP 1110

Query: 221  ATWMLDVTSSAKESELGIDFAELYKNSELYRRNKELIKELSTPAPGSKDLYFHSQYSRSF 42
            ATWML+V++SAKE ELGIDFAE+YKNSELYRRNK LIKELSTPAPGSKDLYF SQYS SF
Sbjct: 1111 ATWMLEVSTSAKEMELGIDFAEVYKNSELYRRNKALIKELSTPAPGSKDLYFPSQYSTSF 1170

Query: 41   FTQCMACLWKQHW 3
             TQCMACLWKQHW
Sbjct: 1171 LTQCMACLWKQHW 1183


>ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500416|gb|AES81619.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1483

 Score =  360 bits (923), Expect = 1e-97
 Identities = 176/193 (91%), Positives = 188/193 (97%)
 Frame = -1

Query: 581  VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 402
            VGLPGV+GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV+TGRT
Sbjct: 1027 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRT 1086

Query: 401  VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYNP 222
            VVCTIHQPSIDIFESFDELLL+KQGGQEIYVGPLGH+SS+LI+YFEGIHGVSKI DGYNP
Sbjct: 1087 VVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHNSSNLINYFEGIHGVSKIKDGYNP 1146

Query: 221  ATWMLDVTSSAKESELGIDFAELYKNSELYRRNKELIKELSTPAPGSKDLYFHSQYSRSF 42
            ATWML+VT+S+KE ELGIDFAE+Y+NSELYRRNK LIKELSTPAP SKDLYF SQYSRSF
Sbjct: 1147 ATWMLEVTTSSKERELGIDFAEVYQNSELYRRNKALIKELSTPAPCSKDLYFASQYSRSF 1206

Query: 41   FTQCMACLWKQHW 3
            +TQCMACLWKQHW
Sbjct: 1207 WTQCMACLWKQHW 1219



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = -1

Query: 581 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGR 405
           VG   + G+S  Q+KRLT    LV     +FMDE ++GLD+     ++ ++R  V     
Sbjct: 311 VGNAMLRGISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMRQDVHILNG 370

Query: 404 TVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYN 225
           T + ++ QP  + +  FD+++L+    + IY GP      H++ +FE I    K  D   
Sbjct: 371 TAIISLLQPPPETYNLFDDVILLSD-SRIIYQGP----REHVLEFFESIG--FKCPDRKG 423

Query: 224 PATWMLDVTSSAKESE 177
            A ++ +VTS   + +
Sbjct: 424 VADFLQEVTSRKDQEQ 439


>ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500415|gb|AES81618.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1398

 Score =  354 bits (908), Expect = 7e-96
 Identities = 172/193 (89%), Positives = 187/193 (96%)
 Frame = -1

Query: 581  VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 402
            VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT
Sbjct: 1013 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1072

Query: 401  VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYNP 222
            VVCTIHQPSIDIFESFDELLL+KQGG+EIYVG LGH+SS+LISYFEGIHGV+KI +GYNP
Sbjct: 1073 VVCTIHQPSIDIFESFDELLLLKQGGKEIYVGSLGHNSSNLISYFEGIHGVNKIKEGYNP 1132

Query: 221  ATWMLDVTSSAKESELGIDFAELYKNSELYRRNKELIKELSTPAPGSKDLYFHSQYSRSF 42
            ATWML++T+S+KE +LGIDFAE+YKNS+LYRRNK LI+ELSTPA GSKDLYF SQYSRSF
Sbjct: 1133 ATWMLEITNSSKEVDLGIDFAEVYKNSDLYRRNKTLIEELSTPASGSKDLYFTSQYSRSF 1192

Query: 41   FTQCMACLWKQHW 3
            +TQCMACLWKQHW
Sbjct: 1193 WTQCMACLWKQHW 1205


>ref|XP_003625399.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500414|gb|AES81617.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1469

 Score =  354 bits (908), Expect = 7e-96
 Identities = 172/193 (89%), Positives = 187/193 (96%)
 Frame = -1

Query: 581  VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 402
            VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT
Sbjct: 1013 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1072

Query: 401  VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYNP 222
            VVCTIHQPSIDIFESFDELLL+KQGG+EIYVG LGH+SS+LISYFEGIHGV+KI +GYNP
Sbjct: 1073 VVCTIHQPSIDIFESFDELLLLKQGGKEIYVGSLGHNSSNLISYFEGIHGVNKIKEGYNP 1132

Query: 221  ATWMLDVTSSAKESELGIDFAELYKNSELYRRNKELIKELSTPAPGSKDLYFHSQYSRSF 42
            ATWML++T+S+KE +LGIDFAE+YKNS+LYRRNK LI+ELSTPA GSKDLYF SQYSRSF
Sbjct: 1133 ATWMLEITNSSKEVDLGIDFAEVYKNSDLYRRNKTLIEELSTPASGSKDLYFTSQYSRSF 1192

Query: 41   FTQCMACLWKQHW 3
            +TQCMACLWKQHW
Sbjct: 1193 WTQCMACLWKQHW 1205


>ref|XP_003553514.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1430

 Score =  353 bits (906), Expect = 1e-95
 Identities = 171/193 (88%), Positives = 181/193 (93%)
 Frame = -1

Query: 581  VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 402
            VGLPGV+GLSTEQRKRLTI+VELVANPSIIFMDEPTSGLDARAAA+VMR +R  VDTGRT
Sbjct: 974  VGLPGVNGLSTEQRKRLTISVELVANPSIIFMDEPTSGLDARAAAVVMRAIRKIVDTGRT 1033

Query: 401  VVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYNP 222
            VVCTIHQPSIDIFESFDEL LMK+GGQEIYVGPLGHHS HLISYFEGI GV  I DGYNP
Sbjct: 1034 VVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSYHLISYFEGIKGVRTIEDGYNP 1093

Query: 221  ATWMLDVTSSAKESELGIDFAELYKNSELYRRNKELIKELSTPAPGSKDLYFHSQYSRSF 42
            ATWML+VT+SAKE ELGIDFAELYKNS+LYRRNKELI+ELSTPAPGSKDLYF S+YSRSF
Sbjct: 1094 ATWMLEVTTSAKEMELGIDFAELYKNSDLYRRNKELIEELSTPAPGSKDLYFSSKYSRSF 1153

Query: 41   FTQCMACLWKQHW 3
             TQCMACLWKQHW
Sbjct: 1154 ITQCMACLWKQHW 1166



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
 Frame = -1

Query: 581 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR- 405
           VG   + G+S  QRKR+T    LV     +FMDE ++GLD+     V+ ++++ + + + 
Sbjct: 322 VGNAMLRGISGGQRKRVTTGEMLVGPAKAVFMDEISTGLDSSTTFQVVNSLKHFIHSLKG 381

Query: 404 TVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIHGVSKITDGYN 225
           T V ++ QP+ + +  FD+++L+   GQ +Y GP      H++ +F  +    K  +   
Sbjct: 382 TAVVSLLQPAPETYNLFDDIILLSD-GQIVYQGP----REHVLEFFASVG--FKCPERKG 434

Query: 224 PATWMLDVTSSAKESELGIDFAELYK 147
            A ++ +VTS   + +  +   + Y+
Sbjct: 435 VADFLQEVTSRKDQEQYWVHRDQPYR 460


Top