BLASTX nr result

ID: Glycyrrhiza23_contig00027811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027811
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
emb|CBI33923.3| unnamed protein product [Vitis vinifera]              187   8e-46
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group] g...   142   3e-32
dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]    142   3e-32

>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/121 (77%), Positives = 102/121 (84%)
 Frame = -3

Query: 365 GQKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFMKN 186
           GQ+PNDATF+ VLSACTHAGMVMEGWWYFDLM+RVYKIEPKVEHYGCMVDLLARAG ++N
Sbjct: 400 GQQPNDATFISVLSACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVEN 459

Query: 185 SEELIEKVPVKXXXXXXXXXXXGCRNHSDSELGEIVAKRLIELEPLDIGPYVLLSNIYAA 6
           SEELI  VPVK           GC NH DSELGEIVAKR IELEP DIGPY+LLSN+YAA
Sbjct: 460 SEELIRMVPVKAGSAIWGALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAA 519

Query: 5   Q 3
           +
Sbjct: 520 K 520


>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/121 (71%), Positives = 98/121 (80%)
 Frame = -3

Query: 365 GQKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFMKN 186
           G  PNDATF+CVLSAC H+GM++EGWWYFDLMRR YKIEPKVEHYGCMVDLL RAG MK+
Sbjct: 300 GPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKD 359

Query: 185 SEELIEKVPVKXXXXXXXXXXXGCRNHSDSELGEIVAKRLIELEPLDIGPYVLLSNIYAA 6
            EELI K+P++            CR HS+SEL EIVAKRLIELEP DIGPY+LLSNIYAA
Sbjct: 360 LEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAA 419

Query: 5   Q 3
           +
Sbjct: 420 E 420


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/121 (71%), Positives = 98/121 (80%)
 Frame = -3

Query: 365 GQKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFMKN 186
           G  PNDATF+CVLSAC H+GM++EGWWYFDLMRR YKIEPKVEHYGCMVDLL RAG MK+
Sbjct: 449 GPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKD 508

Query: 185 SEELIEKVPVKXXXXXXXXXXXGCRNHSDSELGEIVAKRLIELEPLDIGPYVLLSNIYAA 6
            EELI K+P++            CR HS+SEL EIVAKRLIELEP DIGPY+LLSNIYAA
Sbjct: 509 LEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAA 568

Query: 5   Q 3
           +
Sbjct: 569 E 569


>ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
           gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|51091564|dbj|BAD36301.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113631371|dbj|BAF25052.1|
           Os09g0407800 [Oryza sativa Japonica Group]
           gi|215740507|dbj|BAG97163.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 612

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/121 (52%), Positives = 84/121 (69%)
 Frame = -3

Query: 365 GQKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFMKN 186
           G +PN+ TF+CVLS+C H G+V+EGWW FD M R Y IEPK EH+GCM+DLL RAG ++ 
Sbjct: 415 GPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFGCMMDLLGRAGLLEQ 474

Query: 185 SEELIEKVPVKXXXXXXXXXXXGCRNHSDSELGEIVAKRLIELEPLDIGPYVLLSNIYAA 6
           SE LIE +  K             +  ++ +LGE V K+LIE+ P ++GPY+LLSNIYAA
Sbjct: 475 SENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMRPTEVGPYILLSNIYAA 534

Query: 5   Q 3
           +
Sbjct: 535 E 535


>dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 613

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/122 (51%), Positives = 84/122 (68%)
 Frame = -3

Query: 368 TGQKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFMK 189
           TG +PN+ TFVCVLS+C H G+V+EGWW FD M R+Y +EPK EH+GCM+DLL RAG + 
Sbjct: 424 TGPRPNETTFVCVLSSCAHGGLVLEGWWCFDRMVRLYGVEPKAEHFGCMMDLLGRAGLLT 483

Query: 188 NSEELIEKVPVKXXXXXXXXXXXGCRNHSDSELGEIVAKRLIELEPLDIGPYVLLSNIYA 9
           +S+ L++ +  K             R  + S LGE V K+LIE+ P ++GPYVLLSNIYA
Sbjct: 484 DSDTLVQNLQEKASPALWGAMVSASRAQNGSRLGEFVGKKLIEMRPKEVGPYVLLSNIYA 543

Query: 8   AQ 3
            +
Sbjct: 544 GE 545


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