BLASTX nr result

ID: Glycyrrhiza23_contig00027775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027775
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30112.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   166   1e-39
ref|XP_003602607.1| hypothetical protein MTR_3g096190 [Medicago ...   165   3e-39
gb|ACJ85644.1| unknown [Medicago truncatula] gi|388511921|gb|AFK...   164   5e-39
ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methy...   164   5e-39

>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/143 (55%), Positives = 107/143 (74%)
 Frame = +3

Query: 12  ELPGIPLAPRRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFRP 191
           ELPGIPL P + ++K GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP D+RP
Sbjct: 97  ELPGIPLVPFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRP 156

Query: 192 DIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQNF 371
           DI+H+ALL I+ S L  AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ  
Sbjct: 157 DILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKL 216

Query: 372 SIKSKGNQGKLLRLIKNPVTQQI 440
           SI + G + KLLR+IKNPVTQ +
Sbjct: 217 SITAVGKREKLLRVIKNPVTQYL 239


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/143 (55%), Positives = 107/143 (74%)
 Frame = +3

Query: 12  ELPGIPLAPRRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFRP 191
           ELPGIPL P + ++K GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP D+RP
Sbjct: 49  ELPGIPLVPFKSNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPADYRP 108

Query: 192 DIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQNF 371
           DI+H+ALL I+ S L  AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ  
Sbjct: 109 DILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKL 168

Query: 372 SIKSKGNQGKLLRLIKNPVTQQI 440
           SI + G + KLLR+IKNPVTQ +
Sbjct: 169 SITAVGKREKLLRVIKNPVTQYL 191


>ref|XP_003602607.1| hypothetical protein MTR_3g096190 [Medicago truncatula]
           gi|355491655|gb|AES72858.1| hypothetical protein
           MTR_3g096190 [Medicago truncatula]
          Length = 282

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12  ELPGIPLAP--RRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDF 185
           ELPGIP+AP   + S K GV FILEKASL  A VGK YQ+LN +EH +FLRK +KNP D+
Sbjct: 58  ELPGIPIAPLNEKNSEKQGVIFILEKASLEVAKVGKTYQLLNSDEHSNFLRKHSKNPGDY 117

Query: 186 RPDIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQ 365
           RPDI H+ALL I+ S +  AGR++ V+IRT++G+LI V+P  +IP+T   F  +M ELLQ
Sbjct: 118 RPDICHQALLSILDSPVNKAGRLKMVYIRTEKGVLIEVKPYVRIPRTFKRFAGVMLELLQ 177

Query: 366 NFSIKSKGNQGKLLRLIKNPVTQQI 440
             SI + G + KLLR IKNPVTQ +
Sbjct: 178 KLSITAAGKREKLLRTIKNPVTQYL 202


>gb|ACJ85644.1| unknown [Medicago truncatula] gi|388511921|gb|AFK44022.1| unknown
           [Medicago truncatula]
          Length = 282

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12  ELPGIPLAP--RRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDF 185
           ELPGIP+AP   + S K GV FILEKASL  A VGK YQ+LN +EH +FLRK +KNP D+
Sbjct: 58  ELPGIPIAPLNEKNSEKQGVIFILEKASLEVAKVGKTYQLLNSDEHSNFLRKHSKNPGDY 117

Query: 186 RPDIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQ 365
           RPDI H+ALL I+ S +  AGR++ V+IRT++G+LI V+P  +IP+T   F  +M ELLQ
Sbjct: 118 RPDICHQALLSILDSPVNKAGRLKMVYIRTEKGVLIEVKPYVRIPRTSKRFAGVMLELLQ 177

Query: 366 NFSIKSKGNQGKLLRLIKNPVTQQI 440
             SI + G + KLLR IKNPVTQ +
Sbjct: 178 KLSITAAGKREKLLRTIKNPVTQYL 202


>ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera] gi|296085405|emb|CBI29137.3| unnamed
           protein product [Vitis vinifera]
          Length = 271

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/144 (54%), Positives = 107/144 (74%)
 Frame = +3

Query: 9   VELPGIPLAPRRQSSKDGVYFILEKASLVAAYVGKKYQILNPEEHGSFLRKKNKNPYDFR 188
           +ELPGIPL P   ++K GV FILE+A L  A VGK YQ+L+ E+H +FLRK NKNP ++R
Sbjct: 48  LELPGIPLVPSNLNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYR 107

Query: 189 PDIVHEALLQIMSSRLRMAGRIRAVFIRTDEGILIRVEPQTQIPKTLGSFCNMMAELLQN 368
           PDI+H+ALL I+ S L  AGR+RAV++RT++G+L  V+P  +IP+T   F  +M +LLQ 
Sbjct: 108 PDILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQK 167

Query: 369 FSIKSKGNQGKLLRLIKNPVTQQI 440
            SI + G + KLLR+IKNPVTQ +
Sbjct: 168 LSITAVGKREKLLRVIKNPVTQYL 191


Top