BLASTX nr result

ID: Glycyrrhiza23_contig00027771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027771
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31214.3| unnamed protein product [Vitis vinifera]              125   8e-27
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...   122   4e-26
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...   122   4e-26
ref|XP_002525676.1| transcription initiation factor brf1, putati...   119   6e-25
ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817...   114   1e-23

>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  125 bits (313), Expect = 8e-27
 Identities = 74/177 (41%), Positives = 93/177 (52%)
 Frame = +2

Query: 95  SEPESIGADDEYVASKDGEHDKSNGEDDMNAETHDESESLSEIDDKEVDGYLLHTEEEKH 274
           +EP+SIGA D+  +  +G     +G DD NA   DESESLS+IDD EVDGY LH E+EK 
Sbjct: 382 AEPKSIGASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGY-LHNEKEKQ 440

Query: 275 YKKILWENMNREYLXXXXXXXXXXXXXXXXXXXNFQNCSDDLIXXXXXXXXXXXXXXXXX 454
           +KKI+WE MN+EYL                   +F++  + L                  
Sbjct: 441 FKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNPEGLKAAQELAAATAAAVAKSR 500

Query: 455 XXXXXXXXXXXXXMGPAQSAVEATRQMLRTKRLSSKINYDRLEELYDQPAALDNPKK 625
                          PAQ+A EATRQML  KRLSSKINYD LE+L+D     +NPKK
Sbjct: 501 KERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINYDVLEKLFDDSVPSENPKK 557


>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score =  122 bits (307), Expect = 4e-26
 Identities = 80/195 (41%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
 Frame = +2

Query: 50  KASNGVYEIQTELHA-SEPESIGADDEYVASKDGEHDKSN--GEDDMNAETHDESESLSE 220
           K S+ V+   +E  +  E E+ G  DE    + G  D  N  G DD+     D+SE+ S+
Sbjct: 411 KESDNVHVDASETASFKEAEAKGTADE----QRGPDDDVNKVGADDLGTCASDDSENWSD 466

Query: 221 IDDKEVDGYLLHTEEEKHYKKILWENMNREYLXXXXXXXXXXXXXXXXXXXNFQNCSDDL 400
           IDD EVDGYL H EEEKHYKKI+WE MNREYL                   NFQNCS+DL
Sbjct: 467 IDDVEVDGYL-HNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDL 525

Query: 401 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPAQSAVEATRQMLRTKRLSSKINYDRL 580
                                            PAQ+A EATRQML  KRLSSKINYD L
Sbjct: 526 KAAKDLAEAAAAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVL 585

Query: 581 EELYDQPAALDNPKK 625
           ++L+D+ A ++   K
Sbjct: 586 DKLFDESAGMEPSAK 600


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score =  122 bits (307), Expect = 4e-26
 Identities = 80/195 (41%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
 Frame = +2

Query: 50  KASNGVYEIQTELHA-SEPESIGADDEYVASKDGEHDKSN--GEDDMNAETHDESESLSE 220
           K S+ V+   +E  +  E E+ G  DE    + G  D  N  G DD+     D+SE+ S+
Sbjct: 411 KESDNVHVDASETASFKEAEAKGTADE----QRGPDDDVNKVGADDLGTCASDDSENWSD 466

Query: 221 IDDKEVDGYLLHTEEEKHYKKILWENMNREYLXXXXXXXXXXXXXXXXXXXNFQNCSDDL 400
           IDD EVDGYL H EEEKHYKKI+WE MNREYL                   NFQNCS+DL
Sbjct: 467 IDDVEVDGYL-HNEEEKHYKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDL 525

Query: 401 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPAQSAVEATRQMLRTKRLSSKINYDRL 580
                                            PAQ+A EATRQML  KRLSSKINYD L
Sbjct: 526 KAAKDLAEAAAAAVAKSRKERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVL 585

Query: 581 EELYDQPAALDNPKK 625
           ++L+D+ A ++   K
Sbjct: 586 DKLFDESAGMEPSAK 600


>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
           gi|223534976|gb|EEF36659.1| transcription initiation
           factor brf1, putative [Ricinus communis]
          Length = 625

 Score =  119 bits (297), Expect = 6e-25
 Identities = 70/181 (38%), Positives = 96/181 (53%)
 Frame = +2

Query: 83  ELHASEPESIGADDEYVASKDGEHDKSNGEDDMNAETHDESESLSEIDDKEVDGYLLHTE 262
           +L + + ES G    ++ + DG + K + +DDM+++  DES++ S+IDD EVDGYL H E
Sbjct: 377 QLLSKKAESTGEAALHLPADDGGYSKLHDDDDMSSKALDESDNFSDIDDAEVDGYL-HNE 435

Query: 263 EEKHYKKILWENMNREYLXXXXXXXXXXXXXXXXXXXNFQNCSDDLIXXXXXXXXXXXXX 442
           EE  +KKI+WE MNREYL                    F++C +++              
Sbjct: 436 EEAQFKKIIWEEMNREYLEEQAAKEAVAAAAKEAWEAKFKDCPEEMQAARELEAAVAAAL 495

Query: 443 XXXXXXXXXXXXXXXXXMGPAQSAVEATRQMLRTKRLSSKINYDRLEELYDQPAALDNPK 622
                              PAQSA EA RQML  KRLSSKINYD LE+L+D+P + D PK
Sbjct: 496 AKSKKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLSSKINYDVLEKLFDEPGSKD-PK 554

Query: 623 K 625
           K
Sbjct: 555 K 555


>ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817609 [Glycine max]
          Length = 604

 Score =  114 bits (286), Expect = 1e-23
 Identities = 78/204 (38%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
 Frame = +2

Query: 20  ESANKSDDLAKASNGVYEIQTE-LHASEPESIGADDEYVASKDGEHDKSNGEDDMNAETH 196
           ES +++  LA ASN  ++   E L A  PESIGA+ E+ A+KDG++D S+ ED       
Sbjct: 334 ESVDEACALANASNDQFKSHKEDLPAYVPESIGANVEHEATKDGKYDDSHRED------- 386

Query: 197 DESESLSEIDDKEVDGYLLHTEEEKHYKKILWENMNREYLXXXXXXXXXXXXXXXXXXXN 376
            ESE+LS+IDD+EVD Y+ H EE KH KKILWE  NREYL                    
Sbjct: 387 -ESETLSDIDDEEVDLYI-HDEEGKHIKKILWETANREYLEEQAAKEAAAAANKKAFEAK 444

Query: 377 FQNCSDDLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPAQSAVEATRQMLRTKR-- 550
           F+NCS+D++                                PAQSA EA  QM   KR  
Sbjct: 445 FENCSEDILAARELAASSIEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNL 504

Query: 551 --LSSKINYDRLEELYDQPAALDN 616
             L SK+N++ L EL+D+    +N
Sbjct: 505 QGLKSKVNFELLNELFDEMDTQEN 528


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