BLASTX nr result

ID: Glycyrrhiza23_contig00027769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027769
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, p...   325   4e-87
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   296   2e-78
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   184   2e-44
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   181   1e-43
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...   166   4e-39

>ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
           truncatula] gi|355509570|gb|AES90712.1|
           Chromodomain-helicase-DNA-binding protein, partial
           [Medicago truncatula]
          Length = 1406

 Score =  325 bits (834), Expect = 4e-87
 Identities = 174/237 (73%), Positives = 186/237 (78%)
 Frame = -3

Query: 713 IPMGKWQCPSCFEGNDQLQPKNNLDSISKRARTKIVNAKSKAVVNSLNLEKVSGIFGSKL 534
           IPMGKWQCPSCFE NDQL+P NNLDSIS+RARTK V  KSKA VN +NLEKVSGIFG+K 
Sbjct: 104 IPMGKWQCPSCFEENDQLKPLNNLDSISRRARTKTVPVKSKAGVNPVNLEKVSGIFGNKH 163

Query: 533 ISKKRSKTKGKSISAMGVKFFEKKPVSSPVDATCSNKPPDPSLGSCMEGTSSCVDDDEKN 354
           ISKKRS TK KSIS MG KFF  KPV SPVDATCS+KP DPSL SCMEGTS C D DEKN
Sbjct: 164 ISKKRS-TKAKSISTMGGKFFGMKPVLSPVDATCSDKPMDPSLESCMEGTS-CADADEKN 221

Query: 353 LNLSPTVSPMDRKSASPIKEVLSPSKITNIEENDDQLEGEPDLSCKKIPLRKTLVLAITA 174
           LNLSPTV+PMDR S SP KEVLSPSKITN++ NDD LE +PDLSC KIP RKTLVLAIT 
Sbjct: 222 LNLSPTVAPMDRMSVSPDKEVLSPSKITNLDANDDLLEEKPDLSCDKIPFRKTLVLAITV 281

Query: 173 GGEEVRKRKHKVINDNTSQKKRRTEXXXXXXXXXXXXXXGNNRVHKKQKSIAHGISI 3
           GGEE+ KRKHKVI DN +QKKRRTE              GNN+V  KQKS  H ISI
Sbjct: 282 GGEEMGKRKHKVIGDNANQKKRRTEKGKKVVITPIKSKSGNNKVQTKQKSKTHKISI 338


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  296 bits (759), Expect = 2e-78
 Identities = 162/237 (68%), Positives = 179/237 (75%), Gaps = 1/237 (0%)
 Frame = -3

Query: 713 IPMGKWQCPSCFEGNDQLQPKNNLDSISKRARTKIVNAKSKAVVNSLNLEKVSGIFGSKL 534
           IP GKWQCPSCFEG DQ  P N+LD ISKRARTKIV  KSK  V+SLNLEKV   FG+KL
Sbjct: 104 IPNGKWQCPSCFEGKDQRMPINHLDPISKRARTKIVTTKSKDQVSSLNLEKV---FGTKL 160

Query: 533 ISKKRSKTKGKSISAMGVKFFEKKPVSSPVDATCSNKPPDPSLGSCMEGTSSCVDDDEKN 354
           ISKKRS +KGK IS+MG  FF K  +SSP D TCSNKP DPSL S MEGTSS V+ DEK 
Sbjct: 161 ISKKRSSSKGKPISSMGANFFGKNLLSSPADETCSNKPIDPSLESPMEGTSSGVNADEKK 220

Query: 353 LNLSPTVSPMDRKSASPIKEVLSPSKITNIEENDDQLEGEPDLSCKKIPLRKTLVLAITA 174
           L+L+ T SPMDRKS SP KE    SKIT++E ND+QLEG+ DLSC KIPLRKTLVLAI A
Sbjct: 221 LSLASTESPMDRKSTSPAKEDEPLSKITSLEANDEQLEGKTDLSCNKIPLRKTLVLAIAA 280

Query: 173 GGEEVRKRKHKVINDNTSQKKRRTE-XXXXXXXXXXXXXXGNNRVHKKQKSIAHGIS 6
            GEEVRKRK+KV+NDNTSQKKR+TE               GNN+VHKKQKSI H IS
Sbjct: 281 SGEEVRKRKNKVVNDNTSQKKRKTEKGKKIVNPSSIKSKSGNNKVHKKQKSITHSIS 337


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  184 bits (467), Expect = 2e-44
 Identities = 111/244 (45%), Positives = 145/244 (59%), Gaps = 8/244 (3%)
 Frame = -3

Query: 713 IPMGKWQCPSCFEGNDQLQPKNNLDSISKRARTKIVNAKSKAVVNSLNLEKVSGIFGSKL 534
           IP GKWQCP C + +D L+P ++LDSISKRARTKIV+AKSK+ + S   EKVS IFGS +
Sbjct: 109 IPNGKWQCPKCCQKSDSLEPMSHLDSISKRARTKIVSAKSKSEIKSSGTEKVSRIFGSSI 168

Query: 533 ISKKRSKTKGKSISAMGVKFFEKKPVSSPVDATCSNKPPDPSLGSCMEGTSSCV-DDDEK 357
           + KKRS  K KS  +  V   EKK  SS +D + S KP  PS+G  +EG+SS V  D+EK
Sbjct: 169 LGKKRSAVKAKSAISRKVCSIEKKLDSSQIDVSSSPKPSHPSVGGSIEGSSSSVFVDNEK 228

Query: 356 NLNLSPTVSPMDRKSASPIKEVLSPSKITNIEENDDQLEGEPDLSCKKIPLRKTLVLAIT 177
             +L+PT +P DR S S  KEVL  S+ T +E ND+    +PDLSC        L+ A+ 
Sbjct: 229 KPDLTPTGTPTDRTSNSAAKEVLPLSRDTALEPNDEASGRKPDLSCDNGTSGNKLIHAMD 288

Query: 176 AGGEEVRKRKHKVINDNTSQKKRRTEXXXXXXXXXXXXXXGNN-------RVHKKQKSIA 18
           A   + RKRKHKV N + SQKK RT+                N       R H+K+++  
Sbjct: 289 AATRKARKRKHKV-NSDDSQKKSRTDKGKHAANTSKKSGSKANSMSPETSRSHRKRRTAD 347

Query: 17  HGIS 6
            G+S
Sbjct: 348 KGVS 351


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223537108|gb|EEF38742.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 2257

 Score =  181 bits (459), Expect = 1e-43
 Identities = 107/241 (44%), Positives = 147/241 (60%), Gaps = 5/241 (2%)
 Frame = -3

Query: 713 IPMGKWQCPSCFEGNDQLQPKNNLDSISKRARTKIVNAKSKAVVNSLNLEKVSGIFGSKL 534
           IPMGKWQCP C++ +D L+    LDSISKRARTKI++   K  V S + EKVS +FGS +
Sbjct: 109 IPMGKWQCPKCYQKSDPLKSITQLDSISKRARTKIISTNPKTGVRSCDTEKVSRLFGSSI 168

Query: 533 ISKKRSKTKGKSISAMGVKFFEKKPVSSPVDATCSNKPPDPSLGSCMEGTSSCV-DDDEK 357
           +SK+RS +KGKS+  +GVK  EK+  SS +D + + KP    LG  +E TSSCV DDD K
Sbjct: 169 LSKRRSSSKGKSVLTLGVKSDEKETASS-LDVSSNIKPNHQFLGGSIEATSSCVHDDDLK 227

Query: 356 NLNLSPTVSPMDRKSASPIKEVLSPSKITNIEENDDQLEGEPDLSCKKIPLRKTLVLAIT 177
               SP     ++KS S  +E L+ SK+T  E ND+  +G+ D SC     RK +VLAI 
Sbjct: 228 KPVASPPPDSPEKKSISLTEETLTYSKLTKSEPNDETSDGKHDSSCNNGSPRKKIVLAIG 287

Query: 176 AGGEEVRKRKHKVINDNTSQKKRRTE----XXXXXXXXXXXXXXGNNRVHKKQKSIAHGI 9
           A  E+ RKRKH+  N+  S KK+RT+                   +N++ +KQK++ HG+
Sbjct: 288 AVSEKDRKRKHEG-NNEDSVKKQRTDKGKLTSKKRRSKANITISASNKLQQKQKTVNHGV 346

Query: 8   S 6
           S
Sbjct: 347 S 347


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score =  166 bits (420), Expect = 4e-39
 Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
 Frame = -3

Query: 713 IPMGKWQCPSCFEGND-QLQPKNNLDSISKRARTKIVNAKSKAVVNSLNLEKVSGIFGSK 537
           IPMGKW CP+C + ND  L   + LD+ISKRARTK+V+AK K  + S + EKVS IFGS 
Sbjct: 154 IPMGKWHCPTCNQKNDLPLDATSYLDTISKRARTKVVSAKCKNGIKSSDTEKVSRIFGSS 213

Query: 536 LISKKRSKTKGKSISAMGVKFFEKKPVSSPVDATCSNKPPDPSLGSCMEGTSSCVD-DDE 360
           +++KKRS  K KSI A  VK F +K V+  +D +C+ KP  P  G+ ++ TSS V+ DDE
Sbjct: 214 ILAKKRSSNKRKSILAHKVKTFGRKSVTPSIDVSCNAKPSHPLDGNTVKSTSSPVNIDDE 273

Query: 359 KNLNLSPTVSPMDRKSASPIKEVLSPSKITNIE-------ENDDQLEGEPDLSCKKIPLR 201
           K  N SP+ S  + KS  P+ EVL+ SK   +E       +N D +E E  +SC+     
Sbjct: 274 KVCNASPSGSQTEEKSVPPVMEVLADSKAEKLEPCDNVPDKNLDVVENEVAISCENASPS 333

Query: 200 KTLVLAITAGGEEVRKRKHKVINDNTSQKKRRT 102
           K  VLA+   G+E RKRK K IN +  QKK +T
Sbjct: 334 KNPVLAVPTAGKETRKRKKK-INKDVGQKKPKT 365


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