BLASTX nr result

ID: Glycyrrhiza23_contig00027732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027732
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   222   3e-56
ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   219   2e-55
ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   207   9e-52
ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_002334208.1| predicted protein [Populus trichocarpa] gi|2...   201   4e-50

>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  222 bits (565), Expect = 3e-56
 Identities = 113/116 (97%), Positives = 115/116 (99%)
 Frame = +3

Query: 3   KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTE 182
           KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKIST+
Sbjct: 585 KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTQ 644

Query: 183 ENLDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 350
           ENLDVE DALDLIA+NADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL
Sbjct: 645 ENLDVEADALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 700


>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  219 bits (558), Expect = 2e-55
 Identities = 112/116 (96%), Positives = 114/116 (98%)
 Frame = +3

Query: 3   KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTE 182
           KTWLGFLKFLEEPP RVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKIST+
Sbjct: 582 KTWLGFLKFLEEPPLRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTQ 641

Query: 183 ENLDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 350
           ENLDVE DALDLIA+NADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL
Sbjct: 642 ENLDVEADALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 697


>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223541434|gb|EEF42984.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1270

 Score =  207 bits (526), Expect = 9e-52
 Identities = 104/116 (89%), Positives = 110/116 (94%)
 Frame = +3

Query: 3   KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTE 182
           K WL FLKFLEEPPQRVVFIFIT+D DNVPRT+QSRCQKYLFNKIKDGDIV RLRK+S+E
Sbjct: 585 KMWLAFLKFLEEPPQRVVFIFITTDPDNVPRTVQSRCQKYLFNKIKDGDIVARLRKVSSE 644

Query: 183 ENLDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 350
           ENLDVE DALDLIA+NADGSLRDAETML+QLSLLGKRITTSLVNELVGVV DEKLL
Sbjct: 645 ENLDVELDALDLIALNADGSLRDAETMLDQLSLLGKRITTSLVNELVGVVPDEKLL 700


>ref|XP_002328811.1| predicted protein [Populus trichocarpa] gi|222839109|gb|EEE77460.1|
           predicted protein [Populus trichocarpa]
          Length = 1197

 Score =  203 bits (516), Expect = 1e-50
 Identities = 102/116 (87%), Positives = 109/116 (93%)
 Frame = +3

Query: 3   KTWLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTE 182
           K WL FLKFLEEPPQRVVFIF+T+D DNVPRT+QSRCQKYLFNKIKDGDIV RLRKIS E
Sbjct: 607 KMWLAFLKFLEEPPQRVVFIFVTTDPDNVPRTVQSRCQKYLFNKIKDGDIVARLRKISKE 666

Query: 183 ENLDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 350
           ENLDVE  ALDLI++NADGSLRDAETML+QLSLLGK+ITTSLVNELVGVVSDEKLL
Sbjct: 667 ENLDVELGALDLISLNADGSLRDAETMLDQLSLLGKKITTSLVNELVGVVSDEKLL 722


>ref|XP_002334208.1| predicted protein [Populus trichocarpa] gi|222870040|gb|EEF07171.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  201 bits (512), Expect = 4e-50
 Identities = 101/114 (88%), Positives = 108/114 (94%)
 Frame = +3

Query: 9   WLGFLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVTRLRKISTEEN 188
           WL FLKFLEEPPQRVVFIF+T+D DNVPRT+QSRCQKYLFNKIKDGDIV RLRKIS EEN
Sbjct: 2   WLAFLKFLEEPPQRVVFIFVTTDPDNVPRTVQSRCQKYLFNKIKDGDIVARLRKISKEEN 61

Query: 189 LDVETDALDLIAVNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLL 350
           LDVE  ALDLI++NADGSLRDAETML+QLSLLGK+ITTSLVNELVGVVSDEKLL
Sbjct: 62  LDVELGALDLISLNADGSLRDAETMLDQLSLLGKKITTSLVNELVGVVSDEKLL 115


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