BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027729
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608278.1| Pentatricopeptide repeat-containing protein ...   200   1e-49
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   155   3e-36
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35

>ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359684|gb|ABD32353.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355509333|gb|AES90475.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  200 bits (508), Expect = 1e-49
 Identities = 94/113 (83%), Positives = 104/113 (92%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGKGNSFAGLVNSIQNASS 181
           EK YQLDTVTCNIVVNGLCRNGELEKA E+V+EMWTDGT+SLGK N  AGLVNSI N S+
Sbjct: 461 EKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVST 520

Query: 182 SMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
           ++PDVITYTT+INGLCKVG+LEEAKKKFIEMMAKNLHPDS+TYDTF+  FCKQ
Sbjct: 521 NVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQ 573



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 57/113 (50%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGKGNSFAGLVNSIQNASS 181
           E G + +  + NIV++GLCRN  +  A  +++ M ++G                      
Sbjct: 356 ENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV--------------------- 394

Query: 182 SMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
             PD +TYTT+++G C  G++ EAK    EM+ K  HP++ T +T + +  K+
Sbjct: 395 -YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKE 446


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/113 (80%), Positives = 102/113 (90%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGKGNSFAGLVNSIQNASS 181
           EK YQ DTVTCNIVVNGLCRNGEL+KA EIV+EMWT+G +SL KGNSFA L+NSI N S+
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 182 SMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
            +PD ITYTT+INGLCKVGRLEEAKKKFIEM+AKNL PDS+TYDTFIW+FCKQ
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQ 573


>ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|222837780|gb|EEE76145.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/114 (63%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGK-GNSFAGLVNSIQNAS 178
           EKGY +DTVTCNIV++GLC NG+L+KA+EIVN MWT G+++LG  GNS+ GLV+   +  
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 179 SSMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
             MPD+I+Y+T+I+GLCK GR+ EAKKKFIEMM KNL PDS  YD FI +FCK+
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKE 481



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
 Frame = +2

Query: 5   KGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSS-----------LGKGNSFA- 148
           K  Q D+   ++ ++  C+ G++  A  ++ +M   G +            LG  N    
Sbjct: 462 KNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFE 521

Query: 149 --GLVNSIQNASSSMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFI 322
             GL++ ++    S PDV  Y  V++ LC+ GR+++A     EM+ K + P+  ++   I
Sbjct: 522 IYGLIDEMRERGVS-PDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580

Query: 323 WTFCK 337
             FCK
Sbjct: 581 KAFCK 585



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/113 (26%), Positives = 54/113 (47%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGKGNSFAGLVNSIQNASS 181
           + G + +  + NIV++GLC+NG L  A  ++  M + G                      
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGV--------------------- 301

Query: 182 SMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
            +PD +TYTT+++G C  G++ EA     EMM     P++ T +  +++  K+
Sbjct: 302 -LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKE 353


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/114 (61%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGK-GNSFAGLVNSIQNAS 178
           EKGY +DTVTCNI++N LC NG+L+KA+EIVN MWT G+++LG  GNSF GLV+   +  
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 179 SSMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCKQ 340
              PD++TY+T+I+GLCK GRL++AKKKFIEMM+K L PDS  YDTFI +FC++
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCRE 572



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
 Frame = +2

Query: 5   KGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSS---------LGKGNS----- 142
           KG Q D+   +  ++  CR G++  A +++ +M   G +          LG G+      
Sbjct: 553 KGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFE 612

Query: 143 FAGLVNSIQNASSSMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFI 322
             GL++ ++    S PDV TY  ++N LC+ GR+ +A     EM+ K + P+  ++   I
Sbjct: 613 LYGLIDEMREKGVS-PDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILI 671

Query: 323 WTFCK 337
             FCK
Sbjct: 672 KAFCK 676


>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/113 (61%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   EKGYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGK-GNSFAGLVNSIQNAS 178
           E+ Y LD VTCNIV++GLC++G+L++A+EIV  MW  G+++LG  GNSF GLV+S  N  
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522

Query: 179 SSMPDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFIWTFCK 337
             +PD+ITY+ +INGLCK GRL+EA+KKFIEM+ K+LHPDS+ YDTFI +FCK
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCK 575



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
 Frame = +2

Query: 8   GYQLDTVTCNIVVNGLCRNGELEKAMEIVNEMWTDGTSSLGKGNSFAGLVNSIQNASSSM 187
           G   +T T N+++ GLC +G  E A E+ ++M   G        SF  LV     A  SM
Sbjct: 146 GVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRP--NEFSFGILVRGYCRAGLSM 203

Query: 188 ---------------PDVITYTTVINGLCKVGRLEEAKKKFIEMMAKNLHPDSMTYDTFI 322
                          P+ + Y T+I+  C+ GR EEA++    M    L PD +T+++ I
Sbjct: 204 RALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRI 263

Query: 323 WTFC 334
              C
Sbjct: 264 SALC 267