BLASTX nr result

ID: Glycyrrhiza23_contig00027712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027712
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811...   165   3e-39
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   160   8e-38
gb|ADN34073.1| retrotransposon protein [Cucumis melo subsp. melo]     154   5e-36
emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]   147   1e-33
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]   146   1e-33

>ref|XP_003553324.1| PREDICTED: uncharacterized protein LOC100811625 [Glycine max]
          Length = 1135

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/138 (57%), Positives = 103/138 (74%)
 Frame = +2

Query: 2   VYKLKKALYGLKQAPRA*NKRINSFLLQQGFVKCCVEYGVYVRVKNNAKILLICLYVDDL 181
           VYKL  ALYGLKQ PRA N +I+SFL+QQ F KC +EYGVYVR  ++ + L+IC YVDDL
Sbjct: 209 VYKLNTALYGLKQTPRAWNMKIDSFLVQQNFTKCTIEYGVYVRNTDSGEFLIICFYVDDL 268

Query: 182 LVTGSDIGDIEEFKVKMQNEFDMTDLGSLSYFLGMEFAETEDGIVLHQKKYTIEVLKKFE 361
           LVTGS   DI  FK ++ +EF+M+DLG LSYFLG+EF  T   I +HQKKY  ++LK+F 
Sbjct: 269 LVTGSSKEDIRVFKGRIIDEFEMSDLGELSYFLGIEFVSTSKEIFMHQKKYAEDILKRFN 328

Query: 362 MINCNSANTPVKTNLKLE 415
           M++CNS  T ++  +KL+
Sbjct: 329 MMDCNSVITLIEIGIKLQ 346


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/139 (55%), Positives = 99/139 (71%)
 Frame = +2

Query: 2    VYKLKKALYGLKQAPRA*NKRINSFLLQQGFVKCCVEYGVYVRVKNNAKILLICLYVDDL 181
            V KL KALYGLKQAPRA N  I+ +    GFV C  EY +YV+  NN  +L ICLYVDDL
Sbjct: 667  VLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVHCQNEYALYVKTFNNGDVLFICLYVDDL 726

Query: 182  LVTGSDIGDIEEFKVKMQNEFDMTDLGSLSYFLGMEFAETEDGIVLHQKKYTIEVLKKFE 361
            + TG++    E+FK  M  EFDMTD+G +SY+LGME  +T++GI + Q++YT EVLKKF 
Sbjct: 727  IFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFN 786

Query: 362  MINCNSANTPVKTNLKLEK 418
            M++CN  NTP++  LKL K
Sbjct: 787  MLDCNPVNTPMEGGLKLSK 805


>gb|ADN34073.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 479

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/139 (53%), Positives = 102/139 (73%)
 Frame = +2

Query: 2   VYKLKKALYGLKQAPRA*NKRINSFLLQQGFVKCCVEYGVYVRVKNNAKILLICLYVDDL 181
           VY LKKALYGLKQAPRA   RI ++ ++ G  KC  E+ ++++ ++  KIL++CLYVDDL
Sbjct: 234 VYHLKKALYGLKQAPRAWYSRIEAYFIKVGSEKCLHEHTLFIKFQHPNKILIVCLYVDDL 293

Query: 182 LVTGSDIGDIEEFKVKMQNEFDMTDLGSLSYFLGMEFAETEDGIVLHQKKYTIEVLKKFE 361
           + TG+D+   EEFK  M  EF+M DLG + YFLG+E  ++  GI ++QKKY +E+L +F+
Sbjct: 294 IYTGNDLIMFEEFKQSMMAEFEMIDLGMMHYFLGIEVIQSVAGIFINQKKYALEILDRFQ 353

Query: 362 MINCNSANTPVKTNLKLEK 418
           M NCNSA TPV+ NLKL K
Sbjct: 354 MENCNSATTPVEPNLKLTK 372


>emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera]
          Length = 1041

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/139 (48%), Positives = 98/139 (70%)
 Frame = +2

Query: 2    VYKLKKALYGLKQAPRA*NKRINSFLLQQGFVKCCVEYGVYVRVKNNAKILLICLYVDDL 181
            VYKLKKALYGLKQ PRA   RI ++ L++GF KC  E+ +++++++  K+ ++CLYVDDL
Sbjct: 741  VYKLKKALYGLKQTPRAWYNRIETYFLKEGFQKCPYEHTLFIKIEDGGKMHIVCLYVDDL 800

Query: 182  LVTGSDIGDIEEFKVKMQNEFDMTDLGSLSYFLGMEFAETEDGIVLHQKKYTIEVLKKFE 361
            + TG++    E FK  M  EF+M+DLG + YFLG+E  +   GI++ QKKY  E+L +F+
Sbjct: 801  IYTGNNTAMFESFKKSMMAEFEMSDLGMMHYFLGIEMMQYSTGILISQKKYVGEILDRFQ 860

Query: 362  MINCNSANTPVKTNLKLEK 418
            M +CN  NTP +  +KL K
Sbjct: 861  MKDCNPVNTPSEFGMKLNK 879


>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
          Length = 1202

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/138 (49%), Positives = 97/138 (70%)
 Frame = +2

Query: 5    YKLKKALYGLKQAPRA*NKRINSFLLQQGFVKCCVEYGVYVRVKNNAKILLICLYVDDLL 184
            YKLKKALYGLKQAPRA   RI+++  ++GF+KC  E+ +Y +   + KIL++CLYVDDL+
Sbjct: 822  YKLKKALYGLKQAPRAWYSRIDAYFTEEGFIKCPYEHTLYTKYGVDKKILIVCLYVDDLI 881

Query: 185  VTGSDIGDIEEFKVKMQNEFDMTDLGSLSYFLGMEFAETEDGIVLHQKKYTIEVLKKFEM 364
             T ++   + +FK  M  EFDMTD+G + YFLG+E  ++  G+ + QKKY +E+L KF +
Sbjct: 882  YTSNNKTMLADFKKSMMKEFDMTDMGLMHYFLGIEVVQSSXGVFISQKKYALEILDKFML 941

Query: 365  INCNSANTPVKTNLKLEK 418
             +CNS  TP +  LKL K
Sbjct: 942  KDCNSVITPSEVGLKLSK 959


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