BLASTX nr result
ID: Glycyrrhiza23_contig00027701
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00027701 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32804.3| unnamed protein product [Vitis vinifera] 125 5e-27 ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 125 5e-27 ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223... 125 5e-27 ref|XP_002308876.1| chromatin remodeling complex subunit [Populu... 122 3e-26 ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ... 119 3e-25 >emb|CBI32804.3| unnamed protein product [Vitis vinifera] Length = 819 Score = 125 bits (313), Expect = 5e-27 Identities = 59/76 (77%), Positives = 70/76 (92%) Frame = +2 Query: 2 LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181 LVGFV+ NIVG++YYSGTISGRE VGLVREPLNPYD NAIKVLNT T+QVGH+DR +A+V Sbjct: 55 LVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAV 114 Query: 182 LSPLIDSQLITVEGIV 229 L+PL+D+ L+TVEGIV Sbjct: 115 LAPLMDANLVTVEGIV 130 >ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1-like [Vitis vinifera] Length = 874 Score = 125 bits (313), Expect = 5e-27 Identities = 59/76 (77%), Positives = 70/76 (92%) Frame = +2 Query: 2 LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181 LVGFV+ NIVG++YYSGTISGRE VGLVREPLNPYD NAIKVLNT T+QVGH+DR +A+V Sbjct: 42 LVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAV 101 Query: 182 LSPLIDSQLITVEGIV 229 L+PL+D+ L+TVEGIV Sbjct: 102 LAPLMDANLVTVEGIV 117 >ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1| helicase, putative [Ricinus communis] Length = 518 Score = 125 bits (313), Expect = 5e-27 Identities = 61/76 (80%), Positives = 71/76 (93%) Frame = +2 Query: 2 LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181 LVGFV+ANIVG++YYSGTI+GRE+VGLVREPLNP+D NAIKVLN ++LQVGH++R ASV Sbjct: 33 LVGFVIANIVGVRYYSGTITGRELVGLVREPLNPHDQNAIKVLNARSLQVGHIERSVASV 92 Query: 182 LSPLIDSQLITVEGIV 229 LSPLIDSQ ITVEGIV Sbjct: 93 LSPLIDSQKITVEGIV 108 >ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854852|gb|EEE92399.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 799 Score = 122 bits (306), Expect = 3e-26 Identities = 58/76 (76%), Positives = 70/76 (92%) Frame = +2 Query: 2 LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181 +VGFV+ANIVGL+YYSGTI+GRE+VGLVREPLNP+D NA+KVLNT+ LQVGH++R A+V Sbjct: 9 MVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSVAAV 68 Query: 182 LSPLIDSQLITVEGIV 229 LSPLIDS +I VEGIV Sbjct: 69 LSPLIDSNMINVEGIV 84 >ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297316976|gb|EFH47398.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 861 Score = 119 bits (297), Expect = 3e-25 Identities = 58/76 (76%), Positives = 68/76 (89%) Frame = +2 Query: 2 LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181 L+GFV+ANIVGLKYYSG I+GREMVGLVREPLNPYD NAI+VLNT++ QVGH++R A+V Sbjct: 38 LIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTVAAV 97 Query: 182 LSPLIDSQLITVEGIV 229 L+PLIDS I VEGIV Sbjct: 98 LAPLIDSHTIIVEGIV 113