BLASTX nr result

ID: Glycyrrhiza23_contig00027701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027701
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32804.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   125   5e-27
ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223...   125   5e-27
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   122   3e-26
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   119   3e-25

>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/76 (77%), Positives = 70/76 (92%)
 Frame = +2

Query: 2   LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181
           LVGFV+ NIVG++YYSGTISGRE VGLVREPLNPYD NAIKVLNT T+QVGH+DR +A+V
Sbjct: 55  LVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAV 114

Query: 182 LSPLIDSQLITVEGIV 229
           L+PL+D+ L+TVEGIV
Sbjct: 115 LAPLMDANLVTVEGIV 130


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/76 (77%), Positives = 70/76 (92%)
 Frame = +2

Query: 2   LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181
           LVGFV+ NIVG++YYSGTISGRE VGLVREPLNPYD NAIKVLNT T+QVGH+DR +A+V
Sbjct: 42  LVGFVIVNIVGIQYYSGTISGRERVGLVREPLNPYDRNAIKVLNTTTIQVGHIDRSAAAV 101

Query: 182 LSPLIDSQLITVEGIV 229
           L+PL+D+ L+TVEGIV
Sbjct: 102 LAPLMDANLVTVEGIV 117


>ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1|
           helicase, putative [Ricinus communis]
          Length = 518

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/76 (80%), Positives = 71/76 (93%)
 Frame = +2

Query: 2   LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181
           LVGFV+ANIVG++YYSGTI+GRE+VGLVREPLNP+D NAIKVLN ++LQVGH++R  ASV
Sbjct: 33  LVGFVIANIVGVRYYSGTITGRELVGLVREPLNPHDQNAIKVLNARSLQVGHIERSVASV 92

Query: 182 LSPLIDSQLITVEGIV 229
           LSPLIDSQ ITVEGIV
Sbjct: 93  LSPLIDSQKITVEGIV 108


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/76 (76%), Positives = 70/76 (92%)
 Frame = +2

Query: 2   LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181
           +VGFV+ANIVGL+YYSGTI+GRE+VGLVREPLNP+D NA+KVLNT+ LQVGH++R  A+V
Sbjct: 9   MVGFVIANIVGLQYYSGTITGRELVGLVREPLNPFDQNALKVLNTRCLQVGHIERSVAAV 68

Query: 182 LSPLIDSQLITVEGIV 229
           LSPLIDS +I VEGIV
Sbjct: 69  LSPLIDSNMINVEGIV 84


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/76 (76%), Positives = 68/76 (89%)
 Frame = +2

Query: 2   LVGFVVANIVGLKYYSGTISGREMVGLVREPLNPYDPNAIKVLNTQTLQVGHLDRHSASV 181
           L+GFV+ANIVGLKYYSG I+GREMVGLVREPLNPYD NAI+VLNT++ QVGH++R  A+V
Sbjct: 38  LIGFVIANIVGLKYYSGRINGREMVGLVREPLNPYDNNAIRVLNTRSEQVGHIERTVAAV 97

Query: 182 LSPLIDSQLITVEGIV 229
           L+PLIDS  I VEGIV
Sbjct: 98  LAPLIDSHTIIVEGIV 113


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