BLASTX nr result

ID: Glycyrrhiza23_contig00027696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027696
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241070.1| uncharacterized protein LOC100788634 [Glycin...   320   1e-85
ref|XP_003526753.1| PREDICTED: uncharacterized protein LOC100799...   318   7e-85
ref|XP_003602355.1| RNA-binding protein 24-B [Medicago truncatul...   289   3e-76
ref|XP_002515069.1| RNA-binding region-containing protein, putat...   188   6e-46
ref|XP_004140591.1| PREDICTED: uncharacterized protein LOC101210...   184   9e-45

>ref|NP_001241070.1| uncharacterized protein LOC100788634 [Glycine max]
           gi|255635629|gb|ACU18164.1| unknown [Glycine max]
          Length = 253

 Score =  320 bits (820), Expect = 1e-85
 Identities = 157/213 (73%), Positives = 169/213 (79%)
 Frame = +2

Query: 2   SQPRQNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITD 181
           SQPRQN    MMSPN+AKQVGD T+TKIFVGGLAW TKRDTLKRYFDQFGEILEAVVITD
Sbjct: 2   SQPRQNK---MMSPNLAKQVGDATYTKIFVGGLAWGTKRDTLKRYFDQFGEILEAVVITD 58

Query: 182 RNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGRRANCNLAALGAQKPDPSITGRQKFNS 361
           + TGRSKGYGFV F+DPNSAI AC NPYPVIDGRRANCNLAALGAQK DPSITGRQK +S
Sbjct: 59  KITGRSKGYGFVTFRDPNSAIRACHNPYPVIDGRRANCNLAALGAQKFDPSITGRQKLSS 118

Query: 362 PSWNTVPIQFQGSSTYYNQHMPQYTFXXXXXXXXXXXXXQDIYGMNYYNVYSGQQFPFRW 541
           PSWN  PI  QG+STYYNQH+P Y F             QD+Y MNY N Y GQQ P RW
Sbjct: 119 PSWNMAPIPLQGTSTYYNQHIPHYPFPYPAYRYPGYPHPQDLYEMNYNNAYGGQQLPLRW 178

Query: 542 FPAYSQPFYGLSRQQSVPTAHLKKTQTTDMSPQ 640
            PAY QPFYGL R Q +PTA++KK QT +MSPQ
Sbjct: 179 LPAYCQPFYGLGR-QFIPTAYVKKAQTPNMSPQ 210


>ref|XP_003526753.1| PREDICTED: uncharacterized protein LOC100799072 [Glycine max]
          Length = 246

 Score =  318 bits (814), Expect = 7e-85
 Identities = 156/204 (76%), Positives = 168/204 (82%), Gaps = 1/204 (0%)
 Frame = +2

Query: 32  MMSPNVAKQVGDTTHTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYG 211
           MMSPN+AKQVGDTT+TKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDR TGRSKGYG
Sbjct: 1   MMSPNLAKQVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRITGRSKGYG 60

Query: 212 FVIFKDPNSAILACQNPYPVIDGRRANCNLAALGAQKPDPSI-TGRQKFNSPSWNTVPIQ 388
           FVIF+DPNSAI AC NPYPVIDGRRANCNLAALGAQK DPSI TGRQKF+SPSWN  PI 
Sbjct: 61  FVIFRDPNSAIRACHNPYPVIDGRRANCNLAALGAQKFDPSITTGRQKFSSPSWNMAPIP 120

Query: 389 FQGSSTYYNQHMPQYTFXXXXXXXXXXXXXQDIYGMNYYNVYSGQQFPFRWFPAYSQPFY 568
            QG+ST+YNQH+P Y F             QD+Y MNY N Y GQQ P  WFPAY QPFY
Sbjct: 121 LQGTSTHYNQHIPHYPFPHPVYRYPGYPHPQDLYEMNYNNAYGGQQLPLCWFPAYCQPFY 180

Query: 569 GLSRQQSVPTAHLKKTQTTDMSPQ 640
           GLSR Q +PTA++KK QT D+SPQ
Sbjct: 181 GLSR-QFIPTAYVKKAQTPDVSPQ 203


>ref|XP_003602355.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355491403|gb|AES72606.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 250

 Score =  289 bits (740), Expect = 3e-76
 Identities = 148/209 (70%), Positives = 163/209 (77%), Gaps = 3/209 (1%)
 Frame = +2

Query: 14  QNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNTG 193
           + NK+ M    V K VGDTT+TKIFVGGLAWETKRDTLKRYFDQFG+ILEAVVITDR TG
Sbjct: 5   RQNKITMSLNVVPKHVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTG 64

Query: 194 RSKGYGFVIFKDPNSAILACQNPYPVIDGRRANCNLAALGAQKPDPSITGRQKFNSPSWN 373
           +SKGYGFV FKDPNSAILACQNP P+IDGRRANCNLA    QKPDPS+TG+QKFNSPS N
Sbjct: 65  KSKGYGFVTFKDPNSAILACQNPNPMIDGRRANCNLA---YQKPDPSLTGKQKFNSPSRN 121

Query: 374 TVPIQFQGSSTYYNQHMPQYTF--XXXXXXXXXXXXXQDIYGMNYYNVY-SGQQFPFRWF 544
           T PIQ QGSS YYNQH+PQY F               QDIY M+Y N Y  G QFPFRWF
Sbjct: 122 TSPIQVQGSSAYYNQHIPQYAFPYPLYRYPHPGYPRPQDIYEMSYNNAYGGGPQFPFRWF 181

Query: 545 PAYSQPFYGLSRQQSVPTAHLKKTQTTDM 631
           PAY QP+YGLSR Q +PTA++KKTQ  D+
Sbjct: 182 PAYYQPYYGLSR-QLIPTAYMKKTQFHDV 209


>ref|XP_002515069.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223545549|gb|EEF47053.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 291

 Score =  188 bits (478), Expect = 6e-46
 Identities = 101/175 (57%), Positives = 115/175 (65%), Gaps = 3/175 (1%)
 Frame = +2

Query: 14  QNNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNTG 193
           Q  +  MM  +   Q  DTT TKIFVGGLAWET+RDT++RYF+QFGEILEAVVITD+NTG
Sbjct: 3   QQRQFQMMGGSNLGQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTG 62

Query: 194 RSKGYGFVIFKDPNSAILACQNPYPVIDGRRANCNLAALGAQK---PDPSITGRQKFNSP 364
           RSKGYGFV FKDP +AI ACQNP PVIDGRRANCNLA+LGA K   P P   G +   +P
Sbjct: 63  RSKGYGFVTFKDPEAAIRACQNPSPVIDGRRANCNLASLGAHKTRSPTPQHGGGRFRPAP 122

Query: 365 SWNTVPIQFQGSSTYYNQHMPQYTFXXXXXXXXXXXXXQDIYGMNYYNVYSGQQF 529
                P     SS+Y +Q   QYTF               IY +NYY VY GQQF
Sbjct: 123 GVVAPPAYHGSSSSYVHQPTGQYTF-PYSAYGYSGYSQDTIYPLNYYGVYGGQQF 176


>ref|XP_004140591.1| PREDICTED: uncharacterized protein LOC101210354 [Cucumis sativus]
           gi|449487325|ref|XP_004157571.1| PREDICTED:
           uncharacterized LOC101210354 [Cucumis sativus]
          Length = 286

 Score =  184 bits (468), Expect = 9e-45
 Identities = 103/185 (55%), Positives = 122/185 (65%), Gaps = 9/185 (4%)
 Frame = +2

Query: 2   SQPRQ----NNKMMMMSPNVAKQVGDTTHTKIFVGGLAWETKRDTLKRYFDQFGEILEAV 169
           SQ RQ    N+     S ++  Q  DTT TKIFVGGLAWET+R T++RYF+QFGEILEAV
Sbjct: 2   SQQRQFHNINSSNNSSSLSLGGQYNDTTFTKIFVGGLAWETQRHTMRRYFEQFGEILEAV 61

Query: 170 VITDRNTGRSKGYGFVIFKDPNSAILACQNPYPVIDGRRANCNLAALGAQKPDP-----S 334
           VITD+NTGRSKGYGFV FKDP++AI ACQNP PVIDGRRANCNLA+LGA KP P      
Sbjct: 62  VITDKNTGRSKGYGFVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPHPPTPQHG 121

Query: 335 ITGRQKFNSPSWNTVPIQFQGSSTYYNQHMPQYTFXXXXXXXXXXXXXQDIYGMNYYNVY 514
           + GR +  +    T P     SS+Y +Q   QY+F             + IY +NYY VY
Sbjct: 122 VGGRFR-GASGIVTPPAYHVSSSSYIHQPTSQYSFPLSGYGFAGYSQDR-IYPLNYYGVY 179

Query: 515 SGQQF 529
            GQQF
Sbjct: 180 GGQQF 184


Top