BLASTX nr result

ID: Glycyrrhiza23_contig00027688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027688
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...   165   3e-39
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...   100   2e-19
ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816...    91   1e-16

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
           gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
           factor fip1 [Medicago truncatula]
          Length = 1110

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/117 (70%), Positives = 94/117 (80%)
 Frame = -3

Query: 353 NDSEGTEDSVHVDNKNNHYPLRSNLVNSDTNLKESLSLYCKTSKNIGFNRKPVNIACYSR 174
           NDSEGTEDS+HV N+ NH PLRS+LV+SD  LKESL LY KTSKNI  NRKPVN + YSR
Sbjct: 416 NDSEGTEDSLHVYNERNHSPLRSHLVSSDIGLKESLPLYEKTSKNISVNRKPVNTSYYSR 475

Query: 173 NRGPVQQKWRHQSGRHISGSKLKRHIENDNNVSHIPKSSGRDLSLWGHQFVNYRPKE 3
           N+G VQQ  RHQSGRH+ GSKL++H ENDNNVSHIP+SSGR+LS   HQFV  R  E
Sbjct: 476 NKGSVQQDQRHQSGRHMPGSKLQKHTENDNNVSHIPRSSGRNLSPRCHQFVKNRSDE 532


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
 Frame = -3

Query: 350 DSEGTEDSVHVDNKNNHYPLRSNLVNSDTNLKESLSLYCKTSKNIGFNRKPVNIACYSRN 171
           DSE T++SVHVDN  +  PL+   +N  T +KESL+LY K SKN   N+K V+ A  SR 
Sbjct: 429 DSEATDNSVHVDNDKSLSPLKRKSLNCVTEMKESLALYWKNSKNNSINKKAVSAAYNSRT 488

Query: 170 RGPVQQKWRHQSGRHISGS-KLKRHIENDNNVSHIPKSSGRDLSLWGHQFVNY 15
           RG  +++WR+QSG +   S  + +H ENDN+VS I KSS R+LSL  H+ V+Y
Sbjct: 489 RGQFRKEWRNQSGGYEPHSYDMNKHTENDNDVS-ILKSSARNLSLLAHRPVDY 540


>ref|XP_003534814.1| PREDICTED: uncharacterized protein LOC100816396 [Glycine max]
          Length = 1121

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
 Frame = -3

Query: 353 NDSEGTEDSVHVDNKNNHYPLRSNLVNSDTNLKESLSLYCKTSKNIGFNRKPVNIACYSR 174
           +DSE  ++SV VDN  +  PL+   +N  T++KESL L  K SKN   N+K V+ A  SR
Sbjct: 457 SDSEAMDNSVQVDNDKSFSPLKRKSLNCVTDMKESLPLCWKNSKNNSINKKAVSAAYNSR 516

Query: 173 NRGPVQQKWRHQSGRHISGS-KLKRHIENDNNVSHIPKSSGRDLSLWGHQFVNY 15
            RG  +++WRH+SG +   S  + +H ENDN+VS I KSS R+LSL   + V+Y
Sbjct: 517 TRGQFRKEWRHRSGGYEPSSYDINKHTENDNDVS-ILKSSARNLSLLARRPVDY 569


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