BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027679
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   137   9e-31
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   134   8e-30
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...   134   1e-29

>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/100 (83%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   CNGPSSLPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTV 181
           C GPSSLPLV++IHAHVEKFG YGDIFVPNSLIDSYSRCGS GLD A  LFLAM+ERD V
Sbjct: 130 CTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVV 189

Query: 182 TWNSMIGGLVRGGELEGASKLSNEMPVRDTVSWNAMLDGY 301
           TWNSMIGGLVR GELEGA KL +EMP RD VSWN MLDGY
Sbjct: 190 TWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGY 229


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   CNGPSSLPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTV 181
           C+GPSSLPLV++IHAHVEK G YGDIFVPNSLIDSYSRCG+ GLD A  LFLAMEERD V
Sbjct: 130 CSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVV 189

Query: 182 TWNSMIGGLVRGGELEGASKLSNEMPVRDTVSWNAMLDGY 301
           TWNSMIGGLVR GEL+GA KL +EMP RD VSWN MLDGY
Sbjct: 190 TWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGY 229


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/100 (63%), Positives = 78/100 (78%)
 Frame = +2

Query: 2   CNGPSSLPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTV 181
           CNG   LP VQ+IH HVEK+G +GD+FVPNSLIDSYS+CG  G++ A +LF+ M E+D V
Sbjct: 131 CNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLV 190

Query: 182 TWNSMIGGLVRGGELEGASKLSNEMPVRDTVSWNAMLDGY 301
           +WNSMIGGLV+ G+L  A KL +EM  RD VSWN +LDGY
Sbjct: 191 SWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGY 230



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/85 (35%), Positives = 48/85 (56%)
 Frame = +2

Query: 2   CNGPSSLPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTV 181
           C     L L + +HA ++K  +   + V N+L+D Y++CG   +D+A  +F  M  RD V
Sbjct: 327 CAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGR--VDKALSIFNEMSMRDLV 384

Query: 182 TWNSMIGGLVRGGELEGASKLSNEM 256
           +WN M+ GL   G  E A +L ++M
Sbjct: 385 SWNCMLQGLAMHGHGEKAIQLFSKM 409



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/71 (32%), Positives = 45/71 (63%)
 Frame = +2

Query: 89  NSLIDSYSRCGSDGLDRAKRLFLAMEERDTVTWNSMIGGLVRGGELEGASKLSNEMPVRD 268
           N+++D Y + G   + +A  LF  M ER+ V+W++M+ G  + G++E A  L ++MP ++
Sbjct: 224 NTILDGYVKAGE--MSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKN 281

Query: 269 TVSWNAMLDGY 301
            V+W  ++ G+
Sbjct: 282 LVTWTIIISGF 292


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/100 (62%), Positives = 77/100 (77%)
 Frame = +2

Query: 2   CNGPSSLPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTV 181
           C+G S LP+V+++H H+EK GL  DI+VPN+LID YSRCG  G+  A +LF  M ERDTV
Sbjct: 127 CSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV 186

Query: 182 TWNSMIGGLVRGGELEGASKLSNEMPVRDTVSWNAMLDGY 301
           +WNSM+GGLV+ GEL  A KL +EMP RD +SWN MLDGY
Sbjct: 187 SWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGY 226



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = +2

Query: 74  DIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDTVTWNSMIGGLVRGGELEGASKLSNE 253
           D+   N+++D Y+RC    + RA  LF  M ER+TV+W++M+ G  + G++E A  + ++
Sbjct: 215 DLISWNTMLDGYARCRE--MSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272

Query: 254 M--PVRDTVSWNAMLDGY 301
           M  P ++ V+W  ++ GY
Sbjct: 273 MPFPAKNVVTWTIIIAGY 290


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CNGPSS-LPLVQLIHAHVEKFGLYGDIFVPNSLIDSYSRCGSDGLDRAKRLFLAMEERDT 178
           CNG SS L LV+++HAHVEK G Y DIFVPNSLID Y RCG   ++ A ++F  MEERD 
Sbjct: 133 CNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGD--VEMAMKVFSGMEERDV 190

Query: 179 VTWNSMIGGLVRGGELEGASKLSNEMPVRDTVSWNAMLDGY 301
           V+WNSM+GGLV+ G+L+GA K+ +EMP RD VSWN MLDG+
Sbjct: 191 VSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGF 231



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/71 (33%), Positives = 46/71 (64%)
 Frame = +2

Query: 89  NSLIDSYSRCGSDGLDRAKRLFLAMEERDTVTWNSMIGGLVRGGELEGASKLSNEMPVRD 268
           N+++D +++ G   +D+A +LF  M ERD V+W++M+ G  + G+++ A  L +  PV++
Sbjct: 225 NTMLDGFTKAGE--MDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKN 282

Query: 269 TVSWNAMLDGY 301
            V W  ++ GY
Sbjct: 283 LVLWTTIISGY 293