BLASTX nr result

ID: Glycyrrhiza23_contig00027625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027625
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-...   117   8e-25
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...    95   5e-18
emb|CBI17597.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]    94   1e-17
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...    92   6e-17

>ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = -3

Query: 226 KLHEHILCDSEVKKKIAATVKSVEKLPLKSTFGWELETYFSAVLADVIESIAGAIYIDSG 47
           KL EHILCDS VK  IA T++ V+ L L+STFGWELETYF  VLADVIESIAGAI++DSG
Sbjct: 597 KLDEHILCDSVVKNNIAQTMEGVKNLSLESTFGWELETYFCQVLADVIESIAGAIFVDSG 656

Query: 46  YKKEVVFQSIRPLLE 2
           YKKEVVFQSI+PLLE
Sbjct: 657 YKKEVVFQSIKPLLE 671


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226  KLHEHILCDS-EVKKKIAATVKSVEKLPLKSTFGWELETYFSAVLADVIESIAGAIYIDS 50
            KLH+HIL  S E+ + I  TV + +KLP++STFGWE E+ F  VL DVIES+AGAI +DS
Sbjct: 1236 KLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDS 1295

Query: 49   GYKKEVVFQSIRPLLE 2
             Y KEVVFQSIRPLLE
Sbjct: 1296 DYNKEVVFQSIRPLLE 1311


>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
          Length = 1340

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226  KLHEHILCDS-EVKKKIAATVKSVEKLPLKSTFGWELETYFSAVLADVIESIAGAIYIDS 50
            KLH+HIL  S E+ + I  TV + +KLP++STFGWE E+ F  VL DVIES+AGAI +DS
Sbjct: 1182 KLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDS 1241

Query: 49   GYKKEVVFQSIRPLLE 2
             Y KEVVFQSIRPLLE
Sbjct: 1242 DYNKEVVFQSIRPLLE 1257


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/76 (64%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = -3

Query: 226  KLHEHILCDS-EVKKKIAATVKSVEKLPLKSTFGWELETYFSAVLADVIESIAGAIYIDS 50
            KLH+HIL  S E+ + I  TV   +KLP +STFGWE E+ F  VL DVIES+AGAI +DS
Sbjct: 1138 KLHQHILHSSQELHRHIVVTVGBFDKLPXESTFGWESESSFPKVLGDVIESLAGAILVDS 1197

Query: 49   GYKKEVVFQSIRPLLE 2
             Y KEVVFQSIRPLLE
Sbjct: 1198 DYNKEVVFQSIRPLLE 1213


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = -3

Query: 223  LHEHILCDS-EVKKKIAATVKSVEKLPLKSTFGWELETYFSAVLADVIESIAGAIYIDSG 47
            L  HIL  S ++ K I ATVK +++  L+STFGWE ET F  VL DVIES+AGAI +DSG
Sbjct: 1304 LDRHILHASHDLHKHIVATVKKIQEFSLESTFGWESETAFPKVLGDVIESLAGAILVDSG 1363

Query: 46   YKKEVVFQSIRPLLE 2
            Y KEVVF+SIRPLLE
Sbjct: 1364 YNKEVVFESIRPLLE 1378


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