BLASTX nr result

ID: Glycyrrhiza23_contig00027614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027614
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330034.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002512518.1| kelch repeat protein, putative [Ricinus comm...    60   1e-07
ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effecto...    60   2e-07
ref|XP_004144810.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    60   2e-07

>ref|XP_002330034.1| predicted protein [Populus trichocarpa] gi|222871459|gb|EEF08590.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = +3

Query: 3   GAFDSGLLMTAAVNGRIFRGVLFAPGAGVVSNSVEPNCSPPCLFPSTQVPLM----NSNH 170
           GAFDSGLLMTA VNG++FRGVLF+P  G VS       +     P+TQ+P++    NSNH
Sbjct: 366 GAFDSGLLMTATVNGKLFRGVLFSPAPGFVSRGA--ILAQNHASPATQIPIVHQFPNSNH 423

Query: 171 VDNFRDSQHVTTCSRSEPCYGLRQ 242
           +D  + S H TT S  E  +  RQ
Sbjct: 424 IDTLKPSHHPTTFSGQESSHSSRQ 447


>ref|XP_002512518.1| kelch repeat protein, putative [Ricinus communis]
           gi|223548479|gb|EEF49970.1| kelch repeat protein,
           putative [Ricinus communis]
          Length = 616

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = +3

Query: 3   GAFDSGLLMTAAVNGRIFRGVLFAPGAGVVSNS--VEPNCSPPCLFPSTQVPLMNSNHVD 176
           GAFDSGLLMTA VNG+IFRGVLFAP + VVS    +  N S P           NSNH++
Sbjct: 489 GAFDSGLLMTATVNGKIFRGVLFAPVSEVVSRGAILAQNPSTPANHIVNAHSFPNSNHME 548

Query: 177 NFRDSQHVTTCSRSEPCYGLRQ 242
           + +  +  +T    E     RQ
Sbjct: 549 SLKICRQPSTFPMPESGQSFRQ 570


>ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effector protein with kelch
           motifs-like, partial [Cucumis sativus]
          Length = 606

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +3

Query: 3   GAFDSGLLMTAAVNGRIFRGVLFAP--GAGVVSNSVEPNCSPPCLFPSTQVPLMNSNHVD 176
           GAFDSG LMTA VNG+++RGVLF P  G GV S +     SPP   P+  VP  NSNH++
Sbjct: 488 GAFDSGFLMTATVNGKVYRGVLFTPVSGPGVFSRASIVTESPP--LPTNTVP--NSNHIE 543

Query: 177 NFRDSQ 194
             +  Q
Sbjct: 544 RSKSLQ 549


>ref|XP_004144810.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101218863 [Cucumis sativus]
          Length = 585

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +3

Query: 3   GAFDSGLLMTAAVNGRIFRGVLFAP--GAGVVSNSVEPNCSPPCLFPSTQVPLMNSNHVD 176
           GAFDSG LMTA VNG+++RGVLF P  G GV S +     SPP   P+  VP  NSNH++
Sbjct: 467 GAFDSGFLMTATVNGKVYRGVLFTPVSGPGVFSRASIVTESPP--LPTNTVP--NSNHIE 522

Query: 177 NFRDSQ 194
             +  Q
Sbjct: 523 RSKSLQ 528


Top