BLASTX nr result

ID: Glycyrrhiza23_contig00027611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027611
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   135   3e-30
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  118   4e-25
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   117   8e-25
gb|AAB82754.1| retrofit [Oryza longistaminata]                        117   1e-24
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S...   115   3e-24

>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Glycine max]
          Length = 1482

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/107 (60%), Positives = 81/107 (75%)
 Frame = +3

Query: 3   LVCKLNRALYGLKQAPRAWYERLTSVLIQFGFKSSRCDPSLFTYTQAGNLLYVLVYVDDI 182
           LVCKL++ALYGLKQAPR W+ERL S L+ +GF +S+CDPSLF   +  N++Y+LVYVDDI
Sbjct: 366 LVCKLDKALYGLKQAPRQWFERLQSTLLHYGFHTSKCDPSLFILKKDRNVVYLLVYVDDI 425

Query: 183 IVTGXXXXXXXXXXHKLNATFALKELGELDYFLGIEVKKTPTGSLLL 323
            + G            LN+TFALK+LG+LDYFLGIEV  TPTGS+LL
Sbjct: 426 NIIGSSNYLIKSLVSHLNSTFALKQLGQLDYFLGIEVHHTPTGSVLL 472


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/105 (54%), Positives = 73/105 (69%)
 Frame = +3

Query: 6    VCKLNRALYGLKQAPRAWYERLTSVLIQFGFKSSRCDPSLFTYTQAGNLLYVLVYVDDII 185
            VCKL++ALYGLKQAPRAWY RL+  L++ GF++S+ D SLF   + G +++VLVYVDDII
Sbjct: 1067 VCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDII 1126

Query: 186  VTGXXXXXXXXXXHKLNATFALKELGELDYFLGIEVKKTPTGSLL 320
            +              LN  FALK+LG+L YFLGIEV K P G +L
Sbjct: 1127 IASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVL 1171


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  117 bits (294), Expect = 8e-25
 Identities = 61/107 (57%), Positives = 74/107 (69%)
 Frame = +3

Query: 3    LVCKLNRALYGLKQAPRAWYERLTSVLIQFGFKSSRCDPSLFTYTQAGNLLYVLVYVDDI 182
            LVCKL++ALYGLKQAPRAW+++L   L QFGF S++ D SLF      + L+VLVYVDDI
Sbjct: 887  LVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDI 946

Query: 183  IVTGXXXXXXXXXXHKLNATFALKELGELDYFLGIEVKKTPTGSLLL 323
            +VTG           +L   F+LK+LGEL YFLGIEVKKT  G L L
Sbjct: 947  VVTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHL 993


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/105 (55%), Positives = 72/105 (68%)
 Frame = +3

Query: 6    VCKLNRALYGLKQAPRAWYERLTSVLIQFGFKSSRCDPSLFTYTQAGNLLYVLVYVDDII 185
            VCKL++ALYGLKQAPRAWY RL+  L++ GF++S+ D SLF   + G L++VLVYVDDII
Sbjct: 1076 VCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDII 1135

Query: 186  VTGXXXXXXXXXXHKLNATFALKELGELDYFLGIEVKKTPTGSLL 320
            V              LN  FALK+LG+L YFLGIEV K   G +L
Sbjct: 1136 VASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVIL 1180


>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
           gi|241942867|gb|EES16012.1| hypothetical protein
           SORBIDRAFT_08g015513 [Sorghum bicolor]
          Length = 757

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/105 (57%), Positives = 70/105 (66%)
 Frame = +3

Query: 6   VCKLNRALYGLKQAPRAWYERLTSVLIQFGFKSSRCDPSLFTYTQAGNLLYVLVYVDDII 185
           VCKL +ALY LKQAPRAWY RL+S LI   FKSSR D SLF Y + G+ ++VLVYVDDII
Sbjct: 396 VCKLEKALYELKQAPRAWYARLSSKLISLRFKSSRADTSLFYYNKGGHTIFVLVYVDDII 455

Query: 186 VTGXXXXXXXXXXHKLNATFALKELGELDYFLGIEVKKTPTGSLL 320
           V              L   FALK+LG+L YFLGIEVK+   G +L
Sbjct: 456 VASSSLEATKVLLSDLQKDFALKDLGDLHYFLGIEVKRDSNGLVL 500


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