BLASTX nr result

ID: Glycyrrhiza23_contig00027561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027561
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37644.1| unknown [Lotus japonicus]                              116   2e-24
ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]         110   2e-22
ref|XP_003597806.1| Cyclin A2 [Medicago truncatula] gi|355486854...   107   1e-21
gb|AAK81695.1| cyclin A2 [Medicago sativa]                            105   4e-21
emb|CAB46083.1| cyclin A2 [Medicago sativa subsp. x varia]            105   4e-21

>gb|AFK37644.1| unknown [Lotus japonicus]
          Length = 481

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/100 (67%), Positives = 72/100 (72%)
 Frame = +1

Query: 1   VNGRLTXXXXXXXXXSGQLPPLKGVAQESQKQPQVANPKRAVSDNTYLPRKKRAVLQDVT 180
           V  R T         SGQLPPLKGV Q  +KQP  AN KRAVSDNT LPRKKRAVLQDV+
Sbjct: 14  VPARWTRARAAAFRASGQLPPLKGVPQGIEKQPLGANLKRAVSDNTCLPRKKRAVLQDVS 73

Query: 181 NISCENTYRSCSNATKIQAKKSKLAAKPAQLNVSKVVPSV 300
           N   E++YRSC NATK QAKKSK+ AK AQLNV KVVP V
Sbjct: 74  NTCSESSYRSCFNATKNQAKKSKI-AKSAQLNVPKVVPCV 112


>ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]
          Length = 482

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/88 (63%), Positives = 68/88 (77%)
 Frame = +1

Query: 49  GQLPPLKGVAQESQKQPQVANPKRAVSDNTYLPRKKRAVLQDVTNISCENTYRSCSNATK 228
           GQLPPLK  AQ++Q Q    N KRAVSDNT + RK++AVLQ+VTN+ CEN Y++C N+T 
Sbjct: 31  GQLPPLKERAQQNQNQLSRVNSKRAVSDNTCVQRKRKAVLQEVTNVCCENAYKACLNSTN 90

Query: 229 IQAKKSKLAAKPAQLNVSKVVPSVAPEP 312
           IQA+KSKL AK  Q+NVSKV PSV  EP
Sbjct: 91  IQARKSKL-AKAGQINVSKVAPSVTVEP 117


>ref|XP_003597806.1| Cyclin A2 [Medicago truncatula] gi|355486854|gb|AES68057.1| Cyclin
           A2 [Medicago truncatula]
          Length = 485

 Score =  107 bits (266), Expect = 1e-21
 Identities = 64/106 (60%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   VNGRLTXXXXXXXXXSGQLPPLKGVAQ--ESQKQPQVANPKRAVSDNTYLPRKKRAVLQD 174
           V  RLT         +GQLPP+K VA   ++QKQP  AN KRAVSD TYLP KKRA+LQD
Sbjct: 12  VPSRLTRARAVALSTTGQLPPMKEVAPGTQNQKQPLRANSKRAVSDVTYLPHKKRAILQD 71

Query: 175 VTNISCENTYRSCSNATKIQAKKSKLAAKPAQLNVSKVVPSVAPEP 312
           VTN   ENT  SC N T+IQAKK K+ AKPAQ NVS  VPS A  P
Sbjct: 72  VTNNCGENTNMSCLNPTEIQAKKRKV-AKPAQSNVSNEVPSAAELP 116


>gb|AAK81695.1| cyclin A2 [Medicago sativa]
          Length = 480

 Score =  105 bits (262), Expect = 4e-21
 Identities = 63/106 (59%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   VNGRLTXXXXXXXXXSGQLPPLKGVAQ--ESQKQPQVANPKRAVSDNTYLPRKKRAVLQD 174
           V  RLT         SGQLPP+K VA   ++QKQP  AN KRAVSD TYLP + RA+LQD
Sbjct: 12  VPSRLTRARAVALSTSGQLPPMKEVAPGTQNQKQPLRANSKRAVSDVTYLPHEMRAILQD 71

Query: 175 VTNISCENTYRSCSNATKIQAKKSKLAAKPAQLNVSKVVPSVAPEP 312
           VTN   ENT RSC N T+IQAKK K+ AKPAQ +VS  VPS A  P
Sbjct: 72  VTNNCGENTNRSCLNPTEIQAKKRKV-AKPAQPDVSNEVPSAAERP 116


>emb|CAB46083.1| cyclin A2 [Medicago sativa subsp. x varia]
          Length = 484

 Score =  105 bits (262), Expect = 4e-21
 Identities = 63/106 (59%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   VNGRLTXXXXXXXXXSGQLPPLKGVAQ--ESQKQPQVANPKRAVSDNTYLPRKKRAVLQD 174
           V  RLT         SGQLPP+K VA   ++QKQP  AN KRAVSD TYLP + RA+LQD
Sbjct: 12  VPSRLTRARAVALSTSGQLPPMKEVAPGTQNQKQPLRANSKRAVSDVTYLPHEMRAILQD 71

Query: 175 VTNISCENTYRSCSNATKIQAKKSKLAAKPAQLNVSKVVPSVAPEP 312
           VTN   ENT RSC N T+IQAKK K+ AKPAQ +VS  VPS A  P
Sbjct: 72  VTNNCGENTNRSCLNPTEIQAKKRKV-AKPAQPDVSNEVPSAAERP 116


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