BLASTX nr result

ID: Glycyrrhiza23_contig00027542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027542
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   138   5e-31
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...    97   2e-18
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...    95   7e-18
ref|XP_003601043.1| ATPase family AAA domain-containing protein ...    85   5e-15
ref|XP_004170911.1| PREDICTED: uncharacterized protein LOC101228...    81   8e-14

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/92 (75%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   EEVEEEKGSCAGENSNKKRKSPGKVTPRKRSSKNNTPKKN-SVNGINGTPSPDSARKINL 177
           E  ++++GSC  EN+ KKRKSP K TPRK++S+NNTPKKN SVNG+ GT SPD ARKI+L
Sbjct: 15  EAEQQQQGSCTPENTFKKRKSPSKSTPRKKTSRNNTPKKNGSVNGVKGTGSPDVARKIDL 74

Query: 178 RLEAKLSAEENSRMFAGRQMHPFFSLWKAEKK 273
           RLEAKLSAEENSRMFAGRQ+HPFFSL KAEKK
Sbjct: 75  RLEAKLSAEENSRMFAGRQIHPFFSLCKAEKK 106


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
 Frame = +1

Query: 1   EEVEEEKGSCAGENSNKKRKSPGKVTPRKRSSKNNTPKKN-SVNGIN-GTPS-------- 150
           +E E  +     EN  K++K   K TPRK++SKN TPKKN S NG N G+ S        
Sbjct: 45  KEDERHEDYSDAENHKKRKKPKAKTTPRKKASKNATPKKNASANGTNKGSTSRQVLADYD 104

Query: 151 PDSARKINLRLEAKLSAEENSRMFAGRQMHPFFSLWKAEKKVQ 279
           P +A + +L LEAKL+AEE+SR+FAGRQ+HPFFSLWKA KKVQ
Sbjct: 105 PVNATEHDLFLEAKLAAEEDSRIFAGRQIHPFFSLWKAGKKVQ 147


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
 Frame = +1

Query: 1   EEVEEEKGSCAGENSNKKRKSPGKVTPRKRSSKNNTPKKN-SVNGIN-GTPS----PDSA 162
           +E E ++     EN  K++K   K TPRK++SKN TPKKN S NG N G+ S     DS 
Sbjct: 46  KEDERDEDYSDSENHKKRKKPKAKTTPRKKASKNATPKKNVSANGTNKGSTSRQVLADSD 105

Query: 163 RKI----NLRLEAKLSAEENSRMFAGRQMHPFFSLWKAEKKVQ 279
           R I    +L LEAKL+AEE+SR+F GRQ+HPFFSLWKA KKVQ
Sbjct: 106 RVIAPVHDLFLEAKLAAEEDSRIFTGRQIHPFFSLWKAGKKVQ 148


>ref|XP_003601043.1| ATPase family AAA domain-containing protein [Medicago truncatula]
           gi|355490091|gb|AES71294.1| ATPase family AAA
           domain-containing protein [Medicago truncatula]
          Length = 1283

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 19/109 (17%)
 Frame = +1

Query: 10  EEEKGSCAGENSNKKRKSPGKVTPRKRSSKNNTPKKNS-----------VNGINGTPSPD 156
           E+++  C  + + +KRKS GK+TP  + SK+ TPKK++            NGI G+ S +
Sbjct: 48  EQDEDYCDTKKNRRKRKSKGKITPLNKGSKSATPKKSASGKKTNEKTSIANGIMGSTSRN 107

Query: 157 SAR--------KINLRLEAKLSAEENSRMFAGRQMHPFFSLWKAEKKVQ 279
                      K +LRLEAKLSAEENSR+FAGR++HP FS  KA KKVQ
Sbjct: 108 VLSDFDKVVTPKPDLRLEAKLSAEENSRLFAGRKVHPLFSSCKAGKKVQ 156


>ref|XP_004170911.1| PREDICTED: uncharacterized protein LOC101228603 [Cucumis sativus]
          Length = 471

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 55/98 (56%), Positives = 61/98 (62%), Gaps = 9/98 (9%)
 Frame = +1

Query: 13  EEKGSCAGENSNKKRKSPGKVTPRKRSSK--------NNTPKKNSVNGINGTPS-PDSAR 165
           EE+  C G    KKRKS GK TP+ RSSK        N TPKK  +N    TP+ PD   
Sbjct: 59  EEEELC-GSQGKKKRKSKGKTTPQSRSSKKAKEKRAVNLTPKK-ILNFEETTPTIPD--- 113

Query: 166 KINLRLEAKLSAEENSRMFAGRQMHPFFSLWKAEKKVQ 279
              LRLEAK++ EENSRMFAGRQMHPFFS  KA KK Q
Sbjct: 114 ---LRLEAKMTREENSRMFAGRQMHPFFSSLKAGKKGQ 148


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