BLASTX nr result

ID: Glycyrrhiza23_contig00027522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027522
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4...   127   1e-27
emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]   109   2e-22
emb|CBI35119.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4...   108   5e-22
ref|XP_002892453.1| T27G7.2 [Arabidopsis lyrata subsp. lyrata] g...   105   5e-21

>ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 325

 Score =  127 bits (318), Expect = 1e-27
 Identities = 71/125 (56%), Positives = 86/125 (68%)
 Frame = +1

Query: 1   LIAAHLDLLRALVDIIVTPDSPARSVKDALKASFAIALHPPNRTVMIRLGAVPSLFGLLD 180
           +I +  D++RALV II   DSP RS+KDALKA F +ALHPP+R V+IRLGAVP+LF L+ 
Sbjct: 129 IITSKPDIIRALVGIISHSDSPTRSIKDALKACFGVALHPPSRIVLIRLGAVPALFALV- 187

Query: 181 SNASERPKSGGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLAXXXXXXXXXXXXXXXXR 360
           +   +  +  GIIEDATAVIAQ+A CEESEEAFRKVSG+ VL                 R
Sbjct: 188 AKGKDGNRRAGIIEDATAVIAQVAACEESEEAFRKVSGVSVLT----MMLSSESGSCSLR 243

Query: 361 TKENA 375
           TKENA
Sbjct: 244 TKENA 248


>emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]
          Length = 309

 Score =  109 bits (273), Expect = 2e-22
 Identities = 67/125 (53%), Positives = 80/125 (64%)
 Frame = +1

Query: 1   LIAAHLDLLRALVDIIVTPDSPARSVKDALKASFAIALHPPNRTVMIRLGAVPSLFGLLD 180
           +I A  D++ ALVDII TP +P RS+KDALKA F I+L+P NR  M+ LGAV +LF L  
Sbjct: 126 IIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFSL-- 183

Query: 181 SNASERPKSGGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLAXXXXXXXXXXXXXXXXR 360
              + +    GI+EDATAVIAQIAGCEE  +AFRKVSGI VL                 R
Sbjct: 184 ---AVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLV-----DLLDPSTGSSIR 235

Query: 361 TKENA 375
           TKENA
Sbjct: 236 TKENA 240


>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  108 bits (270), Expect = 5e-22
 Identities = 66/125 (52%), Positives = 80/125 (64%)
 Frame = +1

Query: 1   LIAAHLDLLRALVDIIVTPDSPARSVKDALKASFAIALHPPNRTVMIRLGAVPSLFGLLD 180
           +I A  D++ ALVDII TP +P RS+KDALKA F I+L+P NR  M+ LGAV +LF L  
Sbjct: 126 IIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTL-- 183

Query: 181 SNASERPKSGGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLAXXXXXXXXXXXXXXXXR 360
              + +    GI+EDATAVIAQIAGCEE  +AFRKVSGI +L                 R
Sbjct: 184 ---AVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILV-----DLLDPSTGSSIR 235

Query: 361 TKENA 375
           TKENA
Sbjct: 236 TKENA 240


>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
          Length = 309

 Score =  108 bits (270), Expect = 5e-22
 Identities = 66/125 (52%), Positives = 80/125 (64%)
 Frame = +1

Query: 1   LIAAHLDLLRALVDIIVTPDSPARSVKDALKASFAIALHPPNRTVMIRLGAVPSLFGLLD 180
           +I A  D++ ALVDII TP +P RS+KDALKA F I+L+P NR  M+ LGAV +LF L  
Sbjct: 126 IIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTL-- 183

Query: 181 SNASERPKSGGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLAXXXXXXXXXXXXXXXXR 360
              + +    GI+EDATAVIAQIAGCEE  +AFRKVSGI +L                 R
Sbjct: 184 ---AVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILV-----DLLDPSTGSSIR 235

Query: 361 TKENA 375
           TKENA
Sbjct: 236 TKENA 240


>ref|XP_002892453.1| T27G7.2 [Arabidopsis lyrata subsp. lyrata]
           gi|297338295|gb|EFH68712.1| T27G7.2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 609

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/103 (54%), Positives = 74/103 (71%)
 Frame = +1

Query: 1   LIAAHLDLLRALVDIIVTPDSPARSVKDALKASFAIALHPPNRTVMIRLGAVPSLFGLLD 180
           +I +  D++ +L+ II   DS  RS+KD+LKA FAIAL+P NR+ MI LGA+P+LF L+ 
Sbjct: 414 IIGSKRDIIFSLIHIIRYADSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLI- 472

Query: 181 SNASERPKSGGIIEDATAVIAQIAGCEESEEAFRKVSGIPVLA 309
                +    GI+EDATAV+AQ+AGCEESEE  R+VSG  VLA
Sbjct: 473 ----VKDSRSGIVEDATAVMAQVAGCEESEEGMRRVSGANVLA 511


Top