BLASTX nr result

ID: Glycyrrhiza23_contig00027499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027499
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   148   5e-34
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   145   3e-33
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   107   8e-22
ref|XP_002512723.1| multidrug resistance-associated protein, put...    95   5e-18
ref|NP_178811.7| multidrug resistance-associated protein 11 [Ara...    78   6e-13

>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/93 (81%), Positives = 79/93 (84%)
 Frame = +1

Query: 1   IMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDPLLSNGGDLEEGGYYDLGNNGNFWDL 180
           IMESLVVLL+ISF IAINVIRIK    KSSLLEDPLLSNG DLEEGGY DLGNNGNFWDL
Sbjct: 78  IMESLVVLLNISFSIAINVIRIKIPSFKSSLLEDPLLSNGVDLEEGGYNDLGNNGNFWDL 137

Query: 181 MTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPS 279
           MTFKFITPVMNHGV+KQLD ED      D+GPS
Sbjct: 138 MTFKFITPVMNHGVIKQLDPEDLLPLPTDIGPS 170


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/94 (75%), Positives = 80/94 (85%)
 Frame = +1

Query: 1   IMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDPLLSNGGDLEEGGYYDLGNNGNFWDL 180
           IMESLVVL+++SFG+ INVIR+KRL  KSSLLEDPLLSNGGDLEEGG +DL NN NFWD 
Sbjct: 174 IMESLVVLMNLSFGVVINVIRLKRLSSKSSLLEDPLLSNGGDLEEGGNHDLENNCNFWDF 233

Query: 181 MTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPSF 282
           MTFKFI+PVMN GV+KQLDS+D      DMGPSF
Sbjct: 234 MTFKFISPVMNQGVLKQLDSDDLLPLLPDMGPSF 267


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/93 (58%), Positives = 67/93 (72%)
 Frame = +1

Query: 1   IMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDPLLSNGGDLEEGGYYDLGNNGNFWDL 180
           + +S VVLLD+ FGI+IN+IRIKR  PKSS +EDPLLS   D+EEG + D GN  ++WD 
Sbjct: 105 LKDSCVVLLDVMFGISINIIRIKRASPKSSSMEDPLLSVDTDIEEGFHGDSGNAKSYWDH 164

Query: 181 MTFKFITPVMNHGVVKQLDSEDXXXXXXDMGPS 279
           MTF+ IT VMNHGV+KQL  +D      DM PS
Sbjct: 165 MTFRTITSVMNHGVIKQLGFDDLLSLPNDMEPS 197


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus
           communis] gi|223547734|gb|EEF49226.1| multidrug
           resistance-associated protein, putative [Ricinus
           communis]
          Length = 1395

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/92 (52%), Positives = 62/92 (67%)
 Frame = +1

Query: 1   IMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDPLLSNGGDLEEGGYYDLGNNGNFWDL 180
           + ES V+LLD+ F I+IN+IRI+   PK+S +EDPLLS   D+E+    D GN  + W+L
Sbjct: 93  LKESSVILLDVLFSISINIIRIRAASPKNSSIEDPLLSADIDIEQAYPVDSGNIQSCWNL 152

Query: 181 MTFKFITPVMNHGVVKQLDSEDXXXXXXDMGP 276
           MTFK ITPVM  G++KQLD ED      DM P
Sbjct: 153 MTFKSITPVMKRGIIKQLDFEDLLGLPDDMEP 184


>ref|NP_178811.7| multidrug resistance-associated protein 11 [Arabidopsis thaliana]
           gi|330251033|gb|AEC06127.1| multidrug
           resistance-associated protein 11 [Arabidopsis thaliana]
          Length = 1404

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/92 (42%), Positives = 58/92 (63%)
 Frame = +1

Query: 1   IMESLVVLLDISFGIAINVIRIKRLPPKSSLLEDPLLSNGGDLEEGGYYDLGNNGNFWDL 180
           + E  +++LDI+FGI+INV+RIK+  PK   LEDPL+ +  D +      +  NG++WDL
Sbjct: 147 VQEICLIMLDIAFGISINVLRIKQAHPKIIPLEDPLIEDDDDQKR-----IEKNGSWWDL 201

Query: 181 MTFKFITPVMNHGVVKQLDSEDXXXXXXDMGP 276
            TF +I  +M HG VKQL+ E+      +M P
Sbjct: 202 FTFGYIGSIMKHGSVKQLELENLLTLPPEMDP 233


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