BLASTX nr result

ID: Glycyrrhiza23_contig00027492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027492
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    97   1e-18
ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    96   4e-18
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...    82   6e-14
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    72   5e-11
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    72   5e-11

>ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 590

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/132 (43%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
 Frame = +1

Query: 49  AALPPTHGGDSD--AKRGKKRGSYNCGRCGLPKKGHNCNIKTPISATTTPTDXXXXXXXX 222
           AALPP HGGD+   AK GKKRGSYNCGRCGLPKKGHNC +KT  S      D        
Sbjct: 8   AALPPAHGGDAADAAKHGKKRGSYNCGRCGLPKKGHNCTVKTLASTADATPDSSLSVVSV 67

Query: 223 XXXXXXXXXXXXXXXRRALSFDDLDDRXXXXXXXXXXXXXXXXSFAXXXXXXXXXXXXXI 402
                          RRALSFDDLD+R                 F               
Sbjct: 68  PSAAAPSLRKPSSNLRRALSFDDLDERLPVVDRSEPDEEVDSDVF----DETDPDLDLDA 123

Query: 403 GSCGLPASLLWE 438
            +CGLPA LLWE
Sbjct: 124 DACGLPARLLWE 135


>ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 592

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 59/140 (42%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
 Frame = +1

Query: 28  MQHSHDAAALPPTHGGDSD--AKRGKKRGSYNCGRCGLPKKGHNCNIKTPIS-ATTTPTD 198
           M HSH  AAL   HGGD+   AKRGKKRGSYNCGRCGLPKKGHNC +KTP S A  TP  
Sbjct: 1   MDHSHIVAALSAPHGGDASDAAKRGKKRGSYNCGRCGLPKKGHNCTVKTPASTAAATPDS 60

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXRRALSFDDLDDRXXXXXXXXXXXXXXXXSFAXXXXXX 378
                                   RALSFDD D+                  F       
Sbjct: 61  SLSIVSLPSSSAVPSLRQSPSNLGRALSFDDFDEPALVVDRYEPDEKVDSDVF----DET 116

Query: 379 XXXXXXXIGSCGLPASLLWE 438
                    + GLPASL+WE
Sbjct: 117 NPDLDLDADAGGLPASLMWE 136


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 58/145 (40%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
 Frame = +1

Query: 28  MQHSHDAAALPPTHGGDS--------DAKRGKKRGSYNCGRCGLPKKGHNCNIKTPISAT 183
           MQH H     PPT GG S        DAKRGKKRGSYNCGRCG PKKGH+CN    +S  
Sbjct: 1   MQHRH--VPHPPTGGGSSASAMAALADAKRGKKRGSYNCGRCGQPKKGHSCN----LSGA 54

Query: 184 TTPTDXXXXXXXXXXXXXXXXXXXXXXXRRALSFDDLDDRXXXXXXXXXXXXXXXXSFAX 363
            TPTD                       RRALSFDD D R                +   
Sbjct: 55  ATPTD------SSASTADPSPRQQYTHLRRALSFDDSDVRRSAGAEEEVVVEDEEEA--- 105

Query: 364 XXXXXXXXXXXXIGSCGLPASLLWE 438
                       +G  GLPAS LWE
Sbjct: 106 ---------GSELGGGGLPASCLWE 121


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/93 (44%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +1

Query: 28  MQHSHDAAALPPTHGGDSDAKRGKKRGSYNCGRCGLPKKGHNCNIKTPISATTTP--TDX 201
           M   H   +  PT   +SD KRGKKRGSYNCGRCGLPKKGH CN+ +  + TT    T  
Sbjct: 1   MDRFHHPQSSAPTVS-NSDLKRGKKRGSYNCGRCGLPKKGHVCNLNSSSTTTTVTAITST 59

Query: 202 XXXXXXXXXXXXXXXXXXXXXXRRALSFDDLDD 300
                                 RRALSFD+ DD
Sbjct: 60  PTTDSTNSARGSTIDPASHSHLRRALSFDEADD 92


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/93 (44%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +1

Query: 28  MQHSHDAAALPPTHGGDSDAKRGKKRGSYNCGRCGLPKKGHNCNIKTPISATTTP--TDX 201
           M   H   +  PT   +SD KRGKKRGSYNCGRCGLPKKGH CN+ +  + TT    T  
Sbjct: 1   MDRFHHPQSSAPTVS-NSDLKRGKKRGSYNCGRCGLPKKGHVCNLNSSSTTTTVTAITST 59

Query: 202 XXXXXXXXXXXXXXXXXXXXXXRRALSFDDLDD 300
                                 RRALSFD+ DD
Sbjct: 60  PTTDSTNSARGSTIDPASHSHLRRALSFDEADD 92


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