BLASTX nr result

ID: Glycyrrhiza23_contig00027463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027463
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
emb|CBI24389.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002531422.1| pentatricopeptide repeat-containing protein,...    98   8e-19
ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/96 (69%), Positives = 74/96 (77%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISWTAMI GF+KSGRV  AIELF+ML  KDDFVWTA+ISGFV+N EY EAL WYARM W
Sbjct: 363 VISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEEALHWYARMIW 422

Query: 110 EGCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           EGC+PNPLTI            LNEGLQIH C+LKM
Sbjct: 423 EGCKPNPLTISSVLAASAALVALNEGLQIHTCILKM 458


>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISWT MITGF+  G++GK+IELF M+ ++DD  WTAVISGFV N EY EA+ W+  M  
Sbjct: 433 VISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLR 492

Query: 110 EGCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           +  RPNPLT+            LN+GLQIH  V+KM
Sbjct: 493 KVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM 528



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISW++M+ G+ K G++G A ELF+ + E++   WTA+I G +    Y      + RM  
Sbjct: 269 VISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRK 328

Query: 110 EG-CRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           EG  + NP T+              EG+Q+H  V +M
Sbjct: 329 EGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRM 365


>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISWT MITGF+  G++GK+IELF M+ ++DD  WTAVISGFV N EY EA+ W+  M  
Sbjct: 354 VISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLR 413

Query: 110 EGCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           +  RPNPLT+            LN+GLQIH  V+KM
Sbjct: 414 KVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM 449



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISW++M+ G+ K G++G A ELF+ + E++   WTA+I G +    Y      + RM  
Sbjct: 190 VISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRK 249

Query: 110 EG-CRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           EG  + NP T+              EG+Q+H  V +M
Sbjct: 250 EGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRM 286


>ref|XP_002531422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528972|gb|EEF30964.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/96 (52%), Positives = 60/96 (62%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           ++SWT MITGF+  G V K I+LF ++ EKDD  WTAVISGFVSN EY EA  W+  M  
Sbjct: 315 VVSWTTMITGFSAKGNVQKGIQLFKIMPEKDDVAWTAVISGFVSNGEYEEAFLWFIEMLK 374

Query: 110 EGCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           +  +PN LT             LN+GLQIHA V KM
Sbjct: 375 KAVKPNSLTFSSMLTASASLATLNQGLQIHAHVEKM 410


>ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/95 (43%), Positives = 58/95 (61%)
 Frame = -2

Query: 287 ISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNWE 108
           +SWT+M+ GFA  G + +AIELF+ +  KD+  WTAVIS  V+N +Y  A+RW+ RM  E
Sbjct: 363 VSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAVISSLVTNGDYLSAVRWFCRMAQE 422

Query: 107 GCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           GC+PN +              LN+G+Q HA  + M
Sbjct: 423 GCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINM 457



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/96 (30%), Positives = 51/96 (53%)
 Frame = -2

Query: 290 LISWTAMITGFAKSGRVGKAIELFDMLREKDDFVWTAVISGFVSNKEYGEALRWYARMNW 111
           +ISWTA++ G  K+G V +A ++F+ + E++   WT++I G+V      + L  +  M  
Sbjct: 199 VISWTAVVDGLCKNGSVLEARKVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQNMRR 258

Query: 110 EGCRPNPLTIXXXXXXXXXXXXLNEGLQIHACVLKM 3
           EG + N  T+            + EG+QIH  ++ M
Sbjct: 259 EGVQVNTTTLSVALDACAESSLVREGIQIHGLIIAM 294


Top