BLASTX nr result
ID: Glycyrrhiza23_contig00027438
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00027438 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-... 74 1e-11 ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-... 70 1e-10 ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot... 66 3e-09 >ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max] Length = 1030 Score = 73.9 bits (180), Expect = 1e-11 Identities = 43/93 (46%), Positives = 50/93 (53%) Frame = -2 Query: 282 DILNELNSKFELLSXXXXXXXXXXXXXXXXXETCEEEGLEFGSAGXXXXXXXXXXXXXXS 103 DILNELNSKFELLS + C+++G EFGSAG Sbjct: 219 DILNELNSKFELLSVERKPKPKHVEGLVGGEKNCDDDGSEFGSAGSSFSPQQESLS---- 274 Query: 102 RDTKNDGDCGVECDSDDSVQELDHFEPENDGSI 4 TKN +E D++DSVQELDHFEPE DGSI Sbjct: 275 EGTKNGDGDDIEYDANDSVQELDHFEPETDGSI 307 >ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max] Length = 938 Score = 70.5 bits (171), Expect = 1e-10 Identities = 40/88 (45%), Positives = 48/88 (54%) Frame = -2 Query: 267 LNSKFELLSXXXXXXXXXXXXXXXXXETCEEEGLEFGSAGXXXXXXXXXXXXXXSRDTKN 88 +NSKFELLS ++C+++G EFGSAG TKN Sbjct: 159 VNSKFELLSVERKPRPKHVEGLAGGKKSCDDDGSEFGSAGSSFSPQQESLS----EGTKN 214 Query: 87 DGDCGVECDSDDSVQELDHFEPENDGSI 4 G+E D+DDSVQELDHFEPENDGSI Sbjct: 215 GDGDGIEYDADDSVQELDHFEPENDGSI 242 >ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago truncatula] gi|355524327|gb|AET04781.1| DNA excision repair protein ERCC-6-like protein [Medicago truncatula] Length = 1129 Score = 65.9 bits (159), Expect = 3e-09 Identities = 46/105 (43%), Positives = 52/105 (49%), Gaps = 12/105 (11%) Frame = -2 Query: 282 DILNELNSKFELLSXXXXXXXXXXXXXXXXXETC------------EEEGLEFGSAGXXX 139 DILNEL+SKF+ LS E+EGLEFGSAG Sbjct: 264 DILNELSSKFDELSVEKTKPKTVTKPKTVTKPKTVTKPVERGKEIFEDEGLEFGSAGSSF 323 Query: 138 XXXXXXXXXXXSRDTKNDGDCGVECDSDDSVQELDHFEPENDGSI 4 +DTKND G+E +SDDSVQ LDHFEPENDGSI Sbjct: 324 SPKQDPHDISS-KDTKNDSG-GLEYESDDSVQVLDHFEPENDGSI 366