BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027437
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...    84   1e-14
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...    75   4e-12
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...    59   3e-07

>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 59/157 (37%), Positives = 72/157 (45%), Gaps = 61/157 (38%)
 Frame = +2

Query: 29  RPTTQPQDETIPQFSAITDFDSPIGQNSVENR-------------------------EPF 133
           + +T+ Q + IPQFSAITDFDSP G +S E +                         EP 
Sbjct: 39  KASTRKQHQNIPQFSAITDFDSPFGLSSDEKQQQAPSHDIPQFSLNSTPRPNLDKKHEPI 98

Query: 134 KV-------EEAPPEEVPQFSDNHSS-----------------------------PKEEK 205
           K        EE PP ++PQFS N +                              PKEEK
Sbjct: 99  KFHDDDEEEEEVPPNDIPQFSINSNPSQNSDVKRDPIKFHDDEEEEAPPDAVNFPPKEEK 158

Query: 206 KTKVKGQGRRRLCKVAYAGDASKNAAVDESDFGDLVD 316
           K KVK QGRRRLCKV +  DA K+ AVDES F +L+D
Sbjct: 159 KAKVKVQGRRRLCKVVHE-DAGKSVAVDESKFDELID 194


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
 Frame = +2

Query: 5   DQHDSPIQ------RPTTQPQDETIPQFSAITDFDSPIGQNSVENREPFKVEEAPPEEVP 166
           D+ D+PIQ      +      D+TIPQFSAITDFDSPIGQNS+EN +P KVEEAP  +VP
Sbjct: 37  DELDTPIQPRNLVYQDVDDDDDDTIPQFSAITDFDSPIGQNSLENLQPDKVEEAPLPKVP 96

Query: 167 QFSDNHSSPKEE 202
            F ++ S  KE+
Sbjct: 97  LFFEDSSLRKEK 108



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/106 (44%), Positives = 56/106 (52%), Gaps = 32/106 (30%)
 Frame = +2

Query: 98  IGQNSVENREPFKVEEAP-PEEVPQFSDNHSSP--------------------------- 193
           + QNS EN +P  V++AP P EVP+  +N+SS                            
Sbjct: 136 LSQNSNENHQPVMVQKAPLPNEVPKDFENYSSSQNYSKILQPVKAEEALVPKEVPRTLDE 195

Query: 194 ---KEEKKTKVKGQGRRRLCKVAYAGDASKNAAVDESDF-GDLVDF 319
              KEEKKTKVK QGRRRLCK A   +ASK+ A DE  F GDLVDF
Sbjct: 196 CSLKEEKKTKVKVQGRRRLCKAA-DKEASKSVADDEPTFDGDLVDF 240


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 41  QPQDETIPQFSAITDFDSPIGQNSVENREPFKVEEAPPEEVPQFSDNHSSPKEEKKTKVK 220
           +P+D+ IP+F  ITDFDS                               SP+EEK TKV+
Sbjct: 64  EPEDDNIPKFCGITDFDS-------------------------------SPEEEKPTKVR 92

Query: 221 GQGRRRLCKVAY---AGDASKNAAVDESDFGDLVDF 319
            +GRRRLCKV+      DAS+    D+S F D+ DF
Sbjct: 93  IEGRRRLCKVSSGDDGDDASREEVKDDSSFDDIADF 128