BLASTX nr result

ID: Glycyrrhiza23_contig00027436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027436
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   321   4e-86
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   317   6e-85
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   280   7e-74
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              280   7e-74
ref|XP_003588647.1| DNA topoisomerase [Medicago truncatula] gi|3...   266   2e-69

>ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1197

 Score =  321 bits (822), Expect = 4e-86
 Identities = 151/161 (93%), Positives = 157/161 (97%)
 Frame = -1

Query: 483  QDRNYVTVKNRVLSPEFRGRMVSAFLLHHFSEVTDYGFTADMETELDNVSAGITEWKGLL 304
            QDRNYVTVK+RVLSPEFRGRMVSAFL +HFSEVTDY FTADMETELDNVSAG+TEWKGLL
Sbjct: 900  QDRNYVTVKSRVLSPEFRGRMVSAFLSNHFSEVTDYSFTADMETELDNVSAGLTEWKGLL 959

Query: 303  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGNYLFASLPDKSRVCPSCMEGTLIFKVSRF 124
            RDYWTRFKSYCERTSNVHIHQVEKMLEKKFG+YLFASLPD+SRVCPSCMEGTLIFKVSRF
Sbjct: 960  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRF 1019

Query: 123  GAGYFIGCDQHPRCKYIAKTLYGTEEEEDTPQPNTKIEEPK 1
            GAGYFIGCDQHPRCKYIAKTLYGTEEEED  QPNT+IEEPK
Sbjct: 1020 GAGYFIGCDQHPRCKYIAKTLYGTEEEEDASQPNTRIEEPK 1060


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  317 bits (812), Expect = 6e-85
 Identities = 148/161 (91%), Positives = 155/161 (96%)
 Frame = -1

Query: 483  QDRNYVTVKNRVLSPEFRGRMVSAFLLHHFSEVTDYGFTADMETELDNVSAGITEWKGLL 304
            QDRNYVTVK+RVLSPEFRG MVSAFL HHFSEV DYGFTADMETELDNVS G+TEWKGLL
Sbjct: 773  QDRNYVTVKSRVLSPEFRGCMVSAFLSHHFSEVMDYGFTADMETELDNVSGGLTEWKGLL 832

Query: 303  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGNYLFASLPDKSRVCPSCMEGTLIFKVSRF 124
            RDYWTRFKSYCERTSNVHIHQVEKMLEKKFG+YLFASLPD+SRVCPSCMEGTLIFKVSRF
Sbjct: 833  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRF 892

Query: 123  GAGYFIGCDQHPRCKYIAKTLYGTEEEEDTPQPNTKIEEPK 1
            GAGYFIGCDQHPRCKYIAKTLYGTEEEED  QPN+++EEPK
Sbjct: 893  GAGYFIGCDQHPRCKYIAKTLYGTEEEEDASQPNSRVEEPK 933


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  280 bits (717), Expect = 7e-74
 Identities = 133/161 (82%), Positives = 142/161 (88%)
 Frame = -1

Query: 483  QDRNYVTVKNRVLSPEFRGRMVSAFLLHHFSEVTDYGFTADMETELDNVSAGITEWKGLL 304
            QDRNYVTVKNRVL PEFRGRMVSAFL HHFSEVTDY FTADMETELDNVSAG+TEWKGLL
Sbjct: 892  QDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLL 951

Query: 303  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGNYLFASLPDKSRVCPSCMEGTLIFKVSRF 124
            +DYWTRF  YC R SNVHIHQVEKMLEKKFG++LF+ LPDKSR CPSCMEGTLIFKVSRF
Sbjct: 952  KDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRF 1011

Query: 123  GAGYFIGCDQHPRCKYIAKTLYGTEEEEDTPQPNTKIEEPK 1
            G+GYFIGCDQHP+CKYIAK L G ++EE   Q  T  EEPK
Sbjct: 1012 GSGYFIGCDQHPKCKYIAKMLDGDDDEEVASQDKT-FEEPK 1051


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  280 bits (717), Expect = 7e-74
 Identities = 133/161 (82%), Positives = 142/161 (88%)
 Frame = -1

Query: 483  QDRNYVTVKNRVLSPEFRGRMVSAFLLHHFSEVTDYGFTADMETELDNVSAGITEWKGLL 304
            QDRNYVTVKNRVL PEFRGRMVSAFL HHFSEVTDY FTADMETELDNVSAG+TEWKGLL
Sbjct: 724  QDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLL 783

Query: 303  RDYWTRFKSYCERTSNVHIHQVEKMLEKKFGNYLFASLPDKSRVCPSCMEGTLIFKVSRF 124
            +DYWTRF  YC R SNVHIHQVEKMLEKKFG++LF+ LPDKSR CPSCMEGTLIFKVSRF
Sbjct: 784  KDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRF 843

Query: 123  GAGYFIGCDQHPRCKYIAKTLYGTEEEEDTPQPNTKIEEPK 1
            G+GYFIGCDQHP+CKYIAK L G ++EE   Q  T  EEPK
Sbjct: 844  GSGYFIGCDQHPKCKYIAKMLDGDDDEEVASQDKT-FEEPK 883


>ref|XP_003588647.1| DNA topoisomerase [Medicago truncatula] gi|355477695|gb|AES58898.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 344

 Score =  266 bits (679), Expect = 2e-69
 Identities = 128/161 (79%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
 Frame = -1

Query: 480 DRNYVTVKNRVLSPEFRGRMVSAFLLHHFSEVTDYGFTADMETELDNVSAGITEWKGLLR 301
           DRNYVTV NRVLSPEFRGRMVSAFL HHFSEVTDY FTAD+ETELDNVSAGIT+WKGLL 
Sbjct: 52  DRNYVTVNNRVLSPEFRGRMVSAFLSHHFSEVTDYSFTADIETELDNVSAGITKWKGLLG 111

Query: 300 DYWTRFKSYCERTSNVHIHQVEKMLEKKFGNYLFASLPDKSRVCPSCMEGTLIFKVSRFG 121
           DYW RFKS C+  S++ I+QVEKMLEKKFG++LF SLP+KSR CPSC EGTLIFKV+RFG
Sbjct: 112 DYWMRFKSNCDHASDIPIYQVEKMLEKKFGDFLFGSLPNKSRSCPSCTEGTLIFKVTRFG 171

Query: 120 AGYFIGCDQHPRCKYIAKTLYGTEEEEDTPQPNTKI-EEPK 1
           +GYFIGCDQHPRCK+    LYG EE+EDTPQPN  I EEPK
Sbjct: 172 SGYFIGCDQHPRCKF--HILYGDEEKEDTPQPNITIGEEPK 210


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