BLASTX nr result

ID: Glycyrrhiza23_contig00027408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027408
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...   174   5e-42
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   162   3e-38
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   139   2e-31
emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   113   2e-23
emb|CBI19029.3| unnamed protein product [Vitis vinifera]              104   6e-21

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
           gi|355478639|gb|AES59842.1| Replication factor C large
           subunit [Medicago truncatula]
          Length = 1178

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/119 (73%), Positives = 101/119 (84%)
 Frame = -2

Query: 360 KDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYLGDAL 181
           KD++EEGSL+NVLLITGPVGSGKSAAVYACA+EQGFEVLELN SDCRN  AVK Y GDAL
Sbjct: 344 KDVSEEGSLKNVLLITGPVGSGKSAAVYACAQEQGFEVLELNTSDCRNATAVKQYFGDAL 403

Query: 180 GSRGLKSLREHTVSSQKKTVEFPPAPALPSGKAAEEMDNGVIELINISNDGAHSPGETS 4
           GS+ +KSL EHTV SQKKT++   APA P+ K A+EMD+ VIE+I +S+DGAH PG TS
Sbjct: 404 GSQCVKSLVEHTVGSQKKTLKLLQAPASPNVKEAKEMDHDVIEMITLSDDGAHGPGGTS 462


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/119 (69%), Positives = 95/119 (79%)
 Frame = -2

Query: 360 KDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYLGDAL 181
           +DINEE SLQNVLLITGP+GSGKSAAVYACA EQ FE+LELNASDCRNG AV++Y GD L
Sbjct: 389 EDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQRFEILELNASDCRNGTAVRNYFGDTL 448

Query: 180 GSRGLKSLREHTVSSQKKTVEFPPAPALPSGKAAEEMDNGVIELINISNDGAHSPGETS 4
           GS G K   E T SSQKKT +  PA AL SGKAA+E+++GV ELI IS+D AH P  +S
Sbjct: 449 GSLGFKRASEITSSSQKKTTKLSPASALQSGKAADEVNDGVNELITISDDEAHIPSGSS 507


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/115 (65%), Positives = 86/115 (74%)
 Frame = -2

Query: 360 KDINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYLGDAL 181
           +DINEE SLQN         SGKSAAVYACA EQGFE+LELNASDCRNG AV++Y GDAL
Sbjct: 393 EDINEEDSLQN---------SGKSAAVYACAEEQGFEILELNASDCRNGTAVRNYFGDAL 443

Query: 180 GSRGLKSLREHTVSSQKKTVEFPPAPALPSGKAAEEMDNGVIELINISNDGAHSP 16
           GS G K   E+T S QKKT +FP A AL SGKAA+E+++GV ELI I +D AH P
Sbjct: 444 GSLGFKRSSENTASPQKKTTKFPLALALFSGKAADEVNDGVDELITIPDDEAHIP 498


>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/109 (52%), Positives = 78/109 (71%)
 Frame = -2

Query: 357 DINEEGSLQNVLLITGPVGSGKSAAVYACAREQGFEVLELNASDCRNGAAVKHYLGDALG 178
           D++E   L+NVLL+TGPVGSGKSAA+YACA+EQGF ++E+N S  R+G  VK  +G+AL 
Sbjct: 325 DLDEGTGLKNVLLVTGPVGSGKSAAIYACAKEQGFRIIEINTSGLRSGTVVKQRIGEALE 384

Query: 177 SRGLKSLREHTVSSQKKTVEFPPAPALPSGKAAEEMDNGVIELINISND 31
           S GLK   E+ + SQ K +     PALP+G A +E ++ VIELI  S++
Sbjct: 385 SHGLKRSLENPIGSQSKHI-MKSFPALPNGTATQEFESKVIELIPSSDE 432


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/120 (47%), Positives = 78/120 (65%), Gaps = 11/120 (9%)
 Frame = -2

Query: 357 DINEEGSLQNVLLITGPVG-----------SGKSAAVYACAREQGFEVLELNASDCRNGA 211
           D++E   L+NVLL+TGPVG           SGKSAA+YACA+EQGF ++E+N S  R+G 
Sbjct: 99  DLDEGTGLKNVLLVTGPVGVYTHSISTAIFSGKSAAIYACAKEQGFRIIEINTSGLRSGT 158

Query: 210 AVKHYLGDALGSRGLKSLREHTVSSQKKTVEFPPAPALPSGKAAEEMDNGVIELINISND 31
            VK  +G+AL S GLK   E+ + SQ K +     PALP+G A +E ++ VIELI  S++
Sbjct: 159 VVKQRIGEALESHGLKRSLENPIGSQSKHI-MKSFPALPNGTATQEFESKVIELIPSSDE 217


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