BLASTX nr result

ID: Glycyrrhiza23_contig00027393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00027393
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC44142.1| putative polyprotein [Cicer arietinum]                215   3e-54
emb|CAJ65807.1| polyprotein [Citrus sinensis]                         209   2e-52
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   207   9e-52
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e...   206   1e-51
emb|CAE05310.2| OSJNBa0056L23.8 [Oryza sativa Japonica Group]         206   2e-51

>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  215 bits (547), Expect = 3e-54
 Identities = 91/133 (68%), Positives = 114/133 (85%)
 Frame = +2

Query: 2   KMYHDLKQNYWWSGMKPEIAEFVAQCLVCQQTKIEHQKPAGLLQPLEIPEWKWEGISMDF 181
           KMY DL+QNYWW GMK  +AE+V+ CL CQ+ K+EHQ+PAG+LQPL+IPEWKW+ ISMDF
Sbjct: 346 KMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRPAGMLQPLDIPEWKWDSISMDF 405

Query: 182 VMGLPRTQSGYDSIWVIVDRLTKSAHFIPVKSSYNTSKLAKVYIREIIRLHGVPTNIVSD 361
           + GLP+T+   DSIWVIVDRLTKSAHF+PV+++Y   +L ++YI EI+RLHGVP++IVSD
Sbjct: 406 ITGLPKTRRKNDSIWVIVDRLTKSAHFLPVRTTYKVDQLTEIYIAEIVRLHGVPSSIVSD 465

Query: 362 RDPKFTSRFWSAL 400
           RDPKFTS FW AL
Sbjct: 466 RDPKFTSHFWGAL 478


>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  209 bits (531), Expect = 2e-52
 Identities = 89/134 (66%), Positives = 111/134 (82%)
 Frame = +2

Query: 2   KMYHDLKQNYWWSGMKPEIAEFVAQCLVCQQTKIEHQKPAGLLQPLEIPEWKWEGISMDF 181
           KMY  L+ +YWW GMK EIAEFV++CLVCQQ K EHQ+PAG  QPL IPEWKWE I+MDF
Sbjct: 377 KMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQPLPIPEWKWEHITMDF 436

Query: 182 VMGLPRTQSGYDSIWVIVDRLTKSAHFIPVKSSYNTSKLAKVYIREIIRLHGVPTNIVSD 361
           V GLPRTQSG+D +WV+VDRLTKS HF+P K++Y+  KL  +++ EI+RLHG P +IVSD
Sbjct: 437 VTGLPRTQSGHDGVWVVVDRLTKSTHFLPFKTTYSMDKLGNIFVAEIVRLHGAPVSIVSD 496

Query: 362 RDPKFTSRFWSALQ 403
           RD +FTS+FW++LQ
Sbjct: 497 RDSRFTSKFWTSLQ 510


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  207 bits (526), Expect = 9e-52
 Identities = 93/133 (69%), Positives = 110/133 (82%)
 Frame = +2

Query: 2    KMYHDLKQNYWWSGMKPEIAEFVAQCLVCQQTKIEHQKPAGLLQPLEIPEWKWEGISMDF 181
            KMY DLK+ YWW  MK EIAEFVA C +CQ+ K EHQ+PAGLLQPL IPEWKWE I MDF
Sbjct: 648  KMYQDLKEKYWWVSMKREIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDF 707

Query: 182  VMGLPRTQSGYDSIWVIVDRLTKSAHFIPVKSSYNTSKLAKVYIREIIRLHGVPTNIVSD 361
            + GLPRTQ+G DSIWVI+DRLTK AHFIPVK++Y +SKLA++Y+ +I+ LHGVP  IVSD
Sbjct: 708  ITGLPRTQTGCDSIWVIIDRLTKVAHFIPVKTTYQSSKLAELYVAKIVCLHGVPKKIVSD 767

Query: 362  RDPKFTSRFWSAL 400
            R  +FTSRFW +L
Sbjct: 768  RGSQFTSRFWKSL 780


>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 897

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/133 (70%), Positives = 111/133 (83%)
 Frame = +2

Query: 2   KMYHDLKQNYWWSGMKPEIAEFVAQCLVCQQTKIEHQKPAGLLQPLEIPEWKWEGISMDF 181
           KMY +LK+ YWW GMK EIAEFVA C VCQ+ K EHQ+PAGLLQPL IP WKWE I MDF
Sbjct: 481 KMYQELKEMYWWVGMKREIAEFVAHCDVCQRVKAEHQRPAGLLQPLSIPGWKWEQIDMDF 540

Query: 182 VMGLPRTQSGYDSIWVIVDRLTKSAHFIPVKSSYNTSKLAKVYIREIIRLHGVPTNIVSD 361
           + GLPRTQSGYDSIWVIVDRLTK AHFIPVK++Y +SKLA++Y+  I+ LHGVP +IVS+
Sbjct: 541 ITGLPRTQSGYDSIWVIVDRLTKVAHFIPVKTTYRSSKLAELYLARIVCLHGVPKSIVSN 600

Query: 362 RDPKFTSRFWSAL 400
           R  +FTS+FW +L
Sbjct: 601 RGSQFTSKFWESL 613


>emb|CAE05310.2| OSJNBa0056L23.8 [Oryza sativa Japonica Group]
          Length = 1472

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/134 (70%), Positives = 110/134 (82%)
 Frame = +2

Query: 2    KMYHDLKQNYWWSGMKPEIAEFVAQCLVCQQTKIEHQKPAGLLQPLEIPEWKWEGISMDF 181
            KMY DLK+ +WW+ MK EIAE+VA C VCQQ K EHQKPAGLLQPL+IPEWKWE I MDF
Sbjct: 1059 KMYQDLKERFWWASMKREIAEYVAVCDVCQQVKAEHQKPAGLLQPLKIPEWKWEEIGMDF 1118

Query: 182  VMGLPRTQSGYDSIWVIVDRLTKSAHFIPVKSSYNTSKLAKVYIREIIRLHGVPTNIVSD 361
            + GLPRT SG+DSIWVIVDRLTK AHFIPVK++Y+ S+LA++Y+  I+ LHGVP  IVSD
Sbjct: 1119 ITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSD 1178

Query: 362  RDPKFTSRFWSALQ 403
            R  +FTS FW  LQ
Sbjct: 1179 RGSQFTSNFWKKLQ 1192


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